Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNU6-251P-201ENST00000363235 104 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 AL356421.1-201ENST00000403255 413 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 RPS24P7-201ENST00000416921 246 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 AC007742.1-201ENST00000425789 329 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 MED14P1-201ENST00000430517 648 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.22□□□□□ -2.21
COL1A1P02452 ELOCP26-201ENST00000436067 329 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.22□□□□□ -2.21
COL1A1P02452 HMGN2P10-201ENST00000448085 265 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 RPS27P1-201ENST00000450552 247 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 HSPE1P24-201ENST00000450782 238 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
COL1A1P02452 NDUFA5P7-201ENST00000452914 242 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 MTND2P24-201ENST00000453434 806 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.22□□□□□ -2.21
COL1A1P02452 AC084024.2-201ENST00000503480 791 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 COX7A2P2-201ENST00000505291 250 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 RNU6-1256P-201ENST00000516539 103 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 IGJP1-201ENST00000522682 475 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 IMMP1LP2-201ENST00000552954 492 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.22□□□□□ -2.21
COL1A1P02452 AL590095.2-201ENST00000604136 117 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 FTX_3.1-201ENST00000610451 147 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 DUXAP10-204ENST00000612052 616 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 MIR6857-201ENST00000613267 93 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 AC016911.1-201ENST00000613297 452 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 AC008443.7-201ENST00000622195 246 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 AL442644.1-201ENST00000454390 3105 ntBASIC1.22□□□□□ -2.21
COL1A1P02452 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.22□□□□□ -2.21
COL1A1P02452 SGO1P1-201ENST00000603525 1447 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.21□□□□□ -2.22
COL1A1P02452 RNU6-115P-201ENST00000364310 107 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 Y_RNA.258-201ENST00000364613 105 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 SNORA23-201ENST00000365128 182 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
COL1A1P02452 HMGN2P39-201ENST00000398005 273 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 CYCSP33-201ENST00000414485 327 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 OR6C66P-201ENST00000414917 930 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 VN1R36P-201ENST00000414936 291 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 AC244636.1-201ENST00000421152 228 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 MTND4LP7-201ENST00000431728 294 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 AC005345.1-201ENST00000431868 217 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.21□□□□□ -2.22
COL1A1P02452 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.21□□□□□ -2.22
COL1A1P02452 Z82210.1-201ENST00000440037 231 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 AC007000.2-201ENST00000442564 487 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 HMGB1P36-201ENST00000487709 576 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
COL1A1P02452 RNA5SP121-201ENST00000516537 101 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.21□□□□□ -2.22
COL1A1P02452 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.21□□□□□ -2.22
COL1A1P02452 MIR3973-201ENST00000579824 107 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 AP000238.1-201ENST00000608759 426 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 MIR6130-201ENST00000619419 109 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 AC132825.7-201ENST00000638744 335 ntBASIC1.21□□□□□ -2.22
COL1A1P02452 RNU1-72P-201ENST00000362976 153 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 RNU6-19P-201ENST00000384718 107 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 MIR514A1-201ENST00000385133 98 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.2□□□□□ -2.22
COL1A1P02452 RPL26P9-201ENST00000457466 433 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 SNORA31.6-201ENST00000516241 130 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 RNA5SP137-201ENST00000516833 135 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.2□□□□□ -2.22
COL1A1P02452 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.2□□□□□ -2.22
COL1A1P02452 HSPA8P13-201ENST00000523715 472 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 AP003066.2-201ENST00000529375 555 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 HSPE1P4-201ENST00000550617 308 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.2□□□□□ -2.22
COL1A1P02452 AC093510.2-201ENST00000562820 896 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 ADAM3B-201ENST00000569937 840 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.2□□□□□ -2.22
COL1A1P02452 AC108706.1-201ENST00000611053 297 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 AL589743.7-201ENST00000612637 233 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 AC104763.3-201ENST00000613765 618 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 RMST_10.1-201ENST00000616309 154 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 AL109933.3-201ENST00000619095 188 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 LINC02211-204ENST00000642024 1070 ntBASIC1.2□□□□□ -2.22
COL1A1P02452 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
COL1A1P02452 RNU6-492P-201ENST00000363035 104 ntBASIC1.19□□□□□ -2.22
COL1A1P02452 U3.13-201ENST00000364804 214 ntBASIC1.19□□□□□ -2.22
COL1A1P02452 MIR150-201ENST00000385048 84 ntBASIC1.19□□□□□ -2.22
COL1A1P02452 MIR16-1-201ENST00000385271 89 ntBASIC1.19□□□□□ -2.22
COL1A1P02452 MIR888-201ENST00000401186 77 ntBASIC1.19□□□□□ -2.22
COL1A1P02452 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.19□□□□□ -2.22
COL1A1P02452 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.19□□□□□ -2.22
COL1A1P02452 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.19□□□□□ -2.22
COL1A1P02452 AL353718.1-201ENST00000451028 517 ntBASIC1.19□□□□□ -2.22
COL1A1P02452 RPL32P14-201ENST00000463196 378 ntBASIC1.19□□□□□ -2.22
COL1A1P02452 RN7SKP179-201ENST00000516126 217 ntBASIC1.19□□□□□ -2.22
COL1A1P02452 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.19□□□□□ -2.22
COL1A1P02452 CYP3A137P-201ENST00000562436 69 ntBASIC1.19□□□□□ -2.22
COL1A1P02452 AC023824.3-201ENST00000569003 562 ntBASIC1.19□□□□□ -2.22
COL1A1P02452 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.19□□□□□ -2.22
COL1A1P02452 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
COL1A1P02452 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.18□□□□□ -2.22
COL1A1P02452 RNU6-878P-201ENST00000384578 110 ntBASIC1.18□□□□□ -2.22
COL1A1P02452 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms