Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 Y_RNA.338-201ENST00000365320 114 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PDGFBP01127 SNORD116-9-201ENST00000384000 95 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 SNORD116-3-201ENST00000384287 95 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 SNORD116-7-201ENST00000384404 95 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 SNORD116-5-201ENST00000384462 95 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 AC016907.1-201ENST00000419483 435 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 SEPT2P1-201ENST00000419651 180 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 MTCO2P34-201ENST00000421994 607 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 AC006366.1-201ENST00000422002 759 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 AL365338.1-201ENST00000422282 858 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PDGFBP01127 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.64□□□□□ -1.99
PDGFBP01127 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.64□□□□□ -1.99
PDGFBP01127 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.64□□□□□ -1.99
PDGFBP01127 ST13P20-201ENST00000447996 1065 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 MTND1P27-201ENST00000451117 902 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 CECR9-201ENST00000453421 199 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 HMGN2P23-201ENST00000456759 269 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 RPL31P3-201ENST00000458430 332 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 RBM43P1-201ENST00000476891 1081 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.64□□□□□ -1.99
PDGFBP01127 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.64□□□□□ -1.99
PDGFBP01127 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.64□□□□□ -1.99
PDGFBP01127 AC132942.1-201ENST00000486753 483 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PDGFBP01127 AC098591.2-201ENST00000510152 315 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 RNA5SP282-201ENST00000516355 108 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 SNORD19.2-201ENST00000516978 73 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 RNA5SP165-201ENST00000517142 115 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 AP003467.2-201ENST00000520175 319 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.64□□□□□ -1.99
PDGFBP01127 MIR3913-1-201ENST00000577744 102 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.64□□□□□ -1.99
PDGFBP01127 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.64□□□□□ -1.99
PDGFBP01127 RSL24D1P11-201ENST00000591045 491 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 AL356280.1-201ENST00000603614 379 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 AC006566.1-201ENST00000608943 513 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 AC010678.1-201ENST00000614118 713 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 AC092140.2-201ENST00000618027 521 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.64□□□□□ -1.99
PDGFBP01127 AL603839.4-201ENST00000624658 1005 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PDGFBP01127 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PDGFBP01127 TEX21P-201ENST00000447107 1476 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 AC010889.1-201ENST00000566193 2666 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
PDGFBP01127 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
PDGFBP01127 RNU6-778P-201ENST00000363269 103 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 U3.6-201ENST00000363622 211 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 RNU6-512P-201ENST00000364438 103 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 SNORD115.1-201ENST00000391109 76 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PDGFBP01127 AL079342.1-201ENST00000401460 267 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.63□□□□□ -1.99
PDGFBP01127 ISCA1P1-201ENST00000426679 387 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.63□□□□□ -1.99
PDGFBP01127 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.63□□□□□ -1.99
PDGFBP01127 MTND6P13-201ENST00000443510 523 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.63□□□□□ -1.99
PDGFBP01127 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.63□□□□□ -1.99
PDGFBP01127 RNA5SP269-201ENST00000459032 137 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 snoU109.1-201ENST00000459339 135 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 RPL21P41-201ENST00000459863 264 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 RN7SL499P-201ENST00000481141 276 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 AC103975.1-201ENST00000482506 483 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 AIG1P1-201ENST00000503376 148 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 AC008716.1-201ENST00000511084 513 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.63□□□□□ -1.99
PDGFBP01127 HMGB1P41-201ENST00000520234 440 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.63□□□□□ -1.99
PDGFBP01127 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.63□□□□□ -1.99
PDGFBP01127 PIGPP4-201ENST00000584447 307 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.63□□□□□ -1.99
PDGFBP01127 U4.3-201ENST00000621047 82 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 AC090582.1-201ENST00000636321 199 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 AC080128.1-201ENST00000474389 1917 ntBASIC2.63□□□□□ -1.99
PDGFBP01127 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PDGFBP01127 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PDGFBP01127 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
PDGFBP01127 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
PDGFBP01127 SNORD56.2-201ENST00000363242 71 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 U8.3-201ENST00000363321 132 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 RNU6-39P-201ENST00000384344 107 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 Y_RNA.553-201ENST00000384670 102 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 AC007064.1-201ENST00000412238 351 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 RPLP0P7-201ENST00000416050 667 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 SKA2P1-201ENST00000425592 390 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PDGFBP01127 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.62□□□□□ -1.99
PDGFBP01127 RPL31P35-201ENST00000431058 377 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 NEFMP1-201ENST00000443423 1006 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 AC244505.5-201ENST00000443639 207 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.62□□□□□ -1.99
PDGFBP01127 FABP5P13-201ENST00000452144 328 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 MTATP6P7-201ENST00000453315 681 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 FABP5P15-201ENST00000453566 214 ntBASIC2.62□□□□□ -1.99
PDGFBP01127 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms