Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL163973.1-201ENST00000484753 577 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 RN7SL20P-201ENST00000488827 297 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 AC104806.1-201ENST00000508720 308 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.83□□□□□ -1.96
CLPTM1O96005 TTC39CP1-201ENST00000512513 755 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 RNU6-123P-201ENST00000516163 102 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 SCARNA15.2-201ENST00000516409 127 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 RN7SKP219-201ENST00000516825 296 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.83□□□□□ -1.96
CLPTM1O96005 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.83□□□□□ -1.96
CLPTM1O96005 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CLPTM1O96005 AC004486.1-201ENST00000546846 233 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.83□□□□□ -1.96
CLPTM1O96005 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.83□□□□□ -1.96
CLPTM1O96005 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.83□□□□□ -1.96
CLPTM1O96005 MIR3921-201ENST00000577308 85 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 AC002545.1-201ENST00000592511 181 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 BNIP3P22-201ENST00000593399 556 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.83□□□□□ -1.96
CLPTM1O96005 AP000787.2-201ENST00000604432 568 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 AL035413.2-201ENST00000604801 525 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 AL158032.1-201ENST00000605401 106 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 AC096577.2-201ENST00000611455 153 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 AC012409.4-201ENST00000612923 249 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.83□□□□□ -1.96
CLPTM1O96005 AC024614.3-201ENST00000637860 256 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.83□□□□□ -1.96
CLPTM1O96005 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CLPTM1O96005 AL137003.2-201ENST00000606924 2538 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CLPTM1O96005 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.83□□□□□ -1.96
CLPTM1O96005 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLPTM1O96005 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CLPTM1O96005 NACAP2-201ENST00000318548 624 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CLPTM1O96005 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLPTM1O96005 Y_RNA.303-201ENST00000364998 94 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 SNORD37.1-201ENST00000390968 65 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 RNU6-903P-201ENST00000391270 109 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 ZNF90P2-204ENST00000419323 1075 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.82□□□□□ -1.96
CLPTM1O96005 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.82□□□□□ -1.96
CLPTM1O96005 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.82□□□□□ -1.96
CLPTM1O96005 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.82□□□□□ -1.96
CLPTM1O96005 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.82□□□□□ -1.96
CLPTM1O96005 MTATP6P23-201ENST00000440153 476 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.82□□□□□ -1.96
CLPTM1O96005 AL353572.1-201ENST00000442490 417 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 MTND1P18-201ENST00000448191 573 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 ELOCP23-201ENST00000452014 332 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 EIF4EP3-201ENST00000498782 656 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 PRDX4P1-201ENST00000507189 574 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 AC098591.2-201ENST00000510152 315 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 SNORA31.3-201ENST00000516029 96 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 Y_RNA.689-201ENST00000516589 107 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 RNA5SP471-201ENST00000516971 106 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 SUB1P1-201ENST00000524415 382 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.82□□□□□ -1.96
CLPTM1O96005 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.82□□□□□ -1.96
CLPTM1O96005 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.82□□□□□ -1.96
CLPTM1O96005 AC013553.2-201ENST00000604244 589 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 AL365204.3-201ENST00000612448 685 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 uc_338.25-201ENST00000613756 156 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 MIR7112-201ENST00000616126 65 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 AC007998.5-201ENST00000622938 237 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.82□□□□□ -1.96
CLPTM1O96005 MTND5P42-201ENST00000637720 498 ntBASIC2.82□□□□□ -1.96
CLPTM1O96005 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
CLPTM1O96005 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
CLPTM1O96005 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLPTM1O96005 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLPTM1O96005 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLPTM1O96005 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.82□□□□□ -1.96
CLPTM1O96005 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.81□□□□□ -1.96
CLPTM1O96005 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLPTM1O96005 RNU6-1287P-201ENST00000362914 107 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 RNU6-1180P-201ENST00000364935 107 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 SNORD21-201ENST00000383953 95 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 RNY3P14-201ENST00000384309 102 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 RNU6-1060P-201ENST00000384664 107 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 RNA5SP252-201ENST00000391131 119 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.81□□□□□ -1.96
CLPTM1O96005 CISD1P1-201ENST00000393907 327 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 Z85995.1-201ENST00000415547 335 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 AL513477.1-202ENST00000417061 214 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.81□□□□□ -1.96
CLPTM1O96005 MTND4P25-201ENST00000441039 533 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 Z75741.1-201ENST00000446793 314 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.81□□□□□ -1.96
CLPTM1O96005 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.81□□□□□ -1.96
CLPTM1O96005 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.81□□□□□ -1.96
CLPTM1O96005 AC105417.1-201ENST00000514691 285 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 RNU6-677P-201ENST00000516914 101 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.81□□□□□ -1.96
CLPTM1O96005 HIGD1AP1-201ENST00000550979 275 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.81□□□□□ -1.96
CLPTM1O96005 MIR5583-1-201ENST00000580941 59 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 MIR548S-201ENST00000581352 82 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 MIR3670-2-201ENST00000582974 65 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms