Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 uc_338.11-201ENST00000619132 160 ntBASIC3.53□□□□□ -1.84
TOP3BO95985 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.53□□□□□ -1.84
TOP3BO95985 AC011155.2-201ENST00000623202 216 ntBASIC3.53□□□□□ -1.84
TOP3BO95985 U6.114-201ENST00000636407 96 ntBASIC3.53□□□□□ -1.84
TOP3BO95985 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.53□□□□□ -1.84
TOP3BO95985 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TOP3BO95985 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TOP3BO95985 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
TOP3BO95985 AC004925.1-201ENST00000624256 2706 ntBASIC3.53□□□□□ -1.84
TOP3BO95985 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.53□□□□□ -1.84
TOP3BO95985 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TOP3BO95985 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.52□□□□□ -1.85
TOP3BO95985 MTND4P14-201ENST00000435799 1354 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 AF127577.6-201ENST00000623352 2191 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TOP3BO95985 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TOP3BO95985 Y_RNA.395-201ENST00000383945 109 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TOP3BO95985 RNU6-882P-201ENST00000391025 103 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.52□□□□□ -1.85
TOP3BO95985 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.52□□□□□ -1.85
TOP3BO95985 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.52□□□□□ -1.85
TOP3BO95985 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.52□□□□□ -1.85
TOP3BO95985 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.52□□□□□ -1.85
TOP3BO95985 AC107399.1-201ENST00000451226 265 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 RBMY2UP-201ENST00000453474 324 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.52□□□□□ -1.85
TOP3BO95985 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.52□□□□□ -1.85
TOP3BO95985 RPS4XP2-201ENST00000458402 793 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 S100A11P2-201ENST00000467589 312 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 RPL23AP14-201ENST00000468281 468 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 RPL31P13-201ENST00000484151 370 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.52□□□□□ -1.85
TOP3BO95985 Y_RNA.654-201ENST00000497848 106 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 SNORA31.20-201ENST00000517111 133 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 MTND4P7-201ENST00000523876 130 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.52□□□□□ -1.85
TOP3BO95985 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TOP3BO95985 AP000889.2-201ENST00000532684 490 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.52□□□□□ -1.85
TOP3BO95985 APOOP3-201ENST00000536787 586 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.52□□□□□ -1.85
TOP3BO95985 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.52□□□□□ -1.85
TOP3BO95985 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.52□□□□□ -1.85
TOP3BO95985 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.52□□□□□ -1.85
TOP3BO95985 AC024619.4-201ENST00000580924 316 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 MIR4293-201ENST00000584305 78 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 AC010205.1-201ENST00000616668 449 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 AL353748.2-201ENST00000622148 471 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
TOP3BO95985 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
TOP3BO95985 AC121333.1-201ENST00000567488 2709 ntBASIC3.52□□□□□ -1.85
TOP3BO95985 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TOP3BO95985 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TOP3BO95985 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TOP3BO95985 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.52□□□□□ -1.85
TOP3BO95985 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.51□□□□□ -1.85
TOP3BO95985 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.51□□□□□ -1.85
TOP3BO95985 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.51□□□□□ -1.85
TOP3BO95985 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TOP3BO95985 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TOP3BO95985 MTND5P16-201ENST00000460269 1703 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 RNU5E-6P-201ENST00000365574 115 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.51□□□□□ -1.85
TOP3BO95985 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TOP3BO95985 Y_RNA.459-201ENST00000384251 102 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 MTCYBP4-201ENST00000401524 249 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 AL592114.1-201ENST00000403842 483 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 RNU6-370P-201ENST00000411008 104 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 RN7SKP53-201ENST00000411337 315 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 RNU6-1304P-201ENST00000411374 106 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.51□□□□□ -1.85
TOP3BO95985 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.51□□□□□ -1.85
TOP3BO95985 AC090774.1-201ENST00000435925 246 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.51□□□□□ -1.85
TOP3BO95985 AC020550.1-201ENST00000447385 163 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.51□□□□□ -1.85
TOP3BO95985 AC010285.1-201ENST00000470580 392 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
TOP3BO95985 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.51□□□□□ -1.85
TOP3BO95985 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.51□□□□□ -1.85
TOP3BO95985 RNU6-1046P-201ENST00000516538 107 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 RNU6-579P-201ENST00000516879 102 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.51□□□□□ -1.85
TOP3BO95985 AL137161.1-201ENST00000532231 390 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.51□□□□□ -1.85
TOP3BO95985 TGIF1P1-201ENST00000558095 802 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 MIR3186-201ENST00000577404 85 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 AF038458.1-201ENST00000588406 262 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 AC067852.3-201ENST00000589177 561 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 AC106900.2-201ENST00000604994 317 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.51□□□□□ -1.85
TOP3BO95985 AC025034.2-201ENST00000623264 286 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 U6.98-201ENST00000637157 84 ntBASIC3.51□□□□□ -1.85
TOP3BO95985 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TOP3BO95985 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
TOP3BO95985 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TOP3BO95985 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms