Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 TOMM22P2-201ENST00000430735 237 ntBASIC0.66□□□□□ -2.3
POLR1AO95602 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.66□□□□□ -2.3
POLR1AO95602 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.66□□□□□ -2.3
POLR1AO95602 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.66□□□□□ -2.3
POLR1AO95602 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.66□□□□□ -2.3
POLR1AO95602 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.66□□□□□ -2.3
POLR1AO95602 AC114737.2-201ENST00000421583 173 ntBASIC0.65□□□□□ -2.31
POLR1AO95602 AC093106.2-201ENST00000428212 385 ntBASIC0.65□□□□□ -2.31
POLR1AO95602 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.65□□□□□ -2.31
POLR1AO95602 AC138853.1-201ENST00000503549 823 ntBASIC0.65□□□□□ -2.31
POLR1AO95602 AP001269.3-201ENST00000588718 329 ntBASIC0.65□□□□□ -2.31
POLR1AO95602 NIFKP6-201ENST00000598115 845 ntBASIC0.65□□□□□ -2.31
POLR1AO95602 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.64□□□□□ -2.31
POLR1AO95602 Y_RNA.390-201ENST00000383932 102 ntBASIC0.64□□□□□ -2.31
POLR1AO95602 AL589655.1-201ENST00000405398 482 ntBASIC0.64□□□□□ -2.31
POLR1AO95602 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.64□□□□□ -2.31
POLR1AO95602 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.64□□□□□ -2.31
POLR1AO95602 FGF7P5-201ENST00000441829 291 ntBASIC0.64□□□□□ -2.31
POLR1AO95602 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.64□□□□□ -2.31
POLR1AO95602 AC008379.1-201ENST00000463655 464 ntBASIC0.64□□□□□ -2.31
POLR1AO95602 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC0.64□□□□□ -2.31
POLR1AO95602 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.64□□□□□ -2.31
POLR1AO95602 BX322635.1-201ENST00000605804 496 ntBASIC0.64□□□□□ -2.31
POLR1AO95602 AC009974.1-201ENST00000608881 455 ntBASIC0.64□□□□□ -2.31
POLR1AO95602 MIR7157-201ENST00000635801 60 ntBASIC0.64□□□□□ -2.31
POLR1AO95602 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
POLR1AO95602 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.64□□□□□ -2.31
POLR1AO95602 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
POLR1AO95602 NDUFS5P1-201ENST00000405668 289 ntBASIC0.64□□□□□ -2.31
POLR1AO95602 RPL37P10-201ENST00000412884 288 ntBASIC0.64□□□□□ -2.31
POLR1AO95602 DYNLT3P2-201ENST00000442517 295 ntBASIC0.64□□□□□ -2.31
POLR1AO95602 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.64□□□□□ -2.31
POLR1AO95602 AC104689.1-201ENST00000473356 768 ntBASIC0.64□□□□□ -2.31
POLR1AO95602 HMGB1P35-201ENST00000503360 598 ntBASIC0.64□□□□□ -2.31
POLR1AO95602 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.64□□□□□ -2.31
POLR1AO95602 UBL5P1-201ENST00000507979 193 ntBASIC0.64□□□□□ -2.31
POLR1AO95602 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.64□□□□□ -2.31
POLR1AO95602 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.64□□□□□ -2.31
POLR1AO95602 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.64□□□□□ -2.31
POLR1AO95602 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.64□□□□□ -2.31
POLR1AO95602 SNORA8-201ENST00000384574 139 ntBASIC0.63□□□□□ -2.31
POLR1AO95602 RNU6-1222P-201ENST00000384615 107 ntBASIC0.63□□□□□ -2.31
POLR1AO95602 AL356421.1-201ENST00000403255 413 ntBASIC0.63□□□□□ -2.31
POLR1AO95602 AC083875.1-201ENST00000419509 405 ntBASIC0.63□□□□□ -2.31
POLR1AO95602 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.63□□□□□ -2.31
POLR1AO95602 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.63□□□□□ -2.31
POLR1AO95602 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.63□□□□□ -2.31
POLR1AO95602 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.63□□□□□ -2.31
POLR1AO95602 MTND6P13-201ENST00000443510 523 ntBASIC0.63□□□□□ -2.31
POLR1AO95602 RPL26P9-201ENST00000457466 433 ntBASIC0.63□□□□□ -2.31
POLR1AO95602 HMGN1P10-201ENST00000474557 553 ntBASIC0.63□□□□□ -2.31
POLR1AO95602 AC008494.2-201ENST00000514544 370 ntBASIC0.63□□□□□ -2.31
POLR1AO95602 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.63□□□□□ -2.31
POLR1AO95602 AL669831.4-202ENST00000590817 238 ntBASIC0.63□□□□□ -2.31
POLR1AO95602 AC008443.7-201ENST00000622195 246 ntBASIC0.63□□□□□ -2.31
POLR1AO95602 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.63□□□□□ -2.31
POLR1AO95602 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
POLR1AO95602 RNU6-272P-201ENST00000411028 104 ntBASIC0.62□□□□□ -2.31
POLR1AO95602 NDUFB4P7-201ENST00000423198 363 ntBASIC0.62□□□□□ -2.31
POLR1AO95602 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.62□□□□□ -2.31
POLR1AO95602 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.62□□□□□ -2.31
POLR1AO95602 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.62□□□□□ -2.31
POLR1AO95602 MIR4422-201ENST00000581938 83 ntBASIC0.62□□□□□ -2.31
POLR1AO95602 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.62□□□□□ -2.31
POLR1AO95602 U4atac.1-201ENST00000618345 95 ntBASIC0.62□□□□□ -2.31
POLR1AO95602 AC083865.1-201ENST00000636634 831 ntBASIC0.62□□□□□ -2.31
POLR1AO95602 RNU1-96P-201ENST00000364163 162 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.61□□□□□ -2.31
POLR1AO95602 RNU6-244P-201ENST00000391028 104 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 RNU6-712P-201ENST00000410558 100 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.61□□□□□ -2.31
POLR1AO95602 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 RPL9P9-202ENST00000466501 579 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 AC134050.1-201ENST00000495088 933 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
POLR1AO95602 MIR892C-201ENST00000516410 77 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 RNA5SP137-201ENST00000516833 135 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 EIF4A1P12-201ENST00000551910 141 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.61□□□□□ -2.31
POLR1AO95602 AC008751.2-201ENST00000597885 980 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 AC099842.1-201ENST00000619919 596 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 AC068057.2-201ENST00000624047 895 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 RNA5SP240-201ENST00000365355 128 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.61□□□□□ -2.31
POLR1AO95602 Y_RNA.493-201ENST00000384422 102 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 RPS24P7-201ENST00000416921 246 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 MTCYBP16-201ENST00000509187 1129 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 RNA5SP285-201ENST00000516619 119 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 POLR2KP1-201ENST00000553226 168 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 AC018638.7-201ENST00000605836 1114 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 DUXAP10-204ENST00000612052 616 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 AC126177.8-201ENST00000618339 1015 ntBASIC0.61□□□□□ -2.31
POLR1AO95602 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.61□□□□□ -2.31
POLR1AO95602 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
POLR1AO95602 RNU6-1155P-201ENST00000363554 107 ntBASIC0.6□□□□□ -2.31
POLR1AO95602 MIR30A-201ENST00000385092 71 ntBASIC0.6□□□□□ -2.31
POLR1AO95602 CST2P1-201ENST00000425770 87 ntBASIC0.6□□□□□ -2.31
POLR1AO95602 SNORD124-201ENST00000459577 104 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms