Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC121334.2-201ENST00000605387 271 ntBASIC2.14□□□□□ -2.07
CLDN9O95484 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.14□□□□□ -2.07
CLDN9O95484 FRG1KP-201ENST00000623592 341 ntBASIC2.14□□□□□ -2.07
CLDN9O95484 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.14□□□□□ -2.07
CLDN9O95484 AL691447.3-201ENST00000635020 330 ntBASIC2.14□□□□□ -2.07
CLDN9O95484 MIR203B-201ENST00000636080 86 ntBASIC2.14□□□□□ -2.07
CLDN9O95484 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLDN9O95484 AL109809.4-201ENST00000603520 2185 ntBASIC2.14□□□□□ -2.07
CLDN9O95484 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.14□□□□□ -2.07
CLDN9O95484 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.14□□□□□ -2.07
CLDN9O95484 U8.2-201ENST00000363156 134 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 Z98749.2-208ENST00000381646 500 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN9O95484 AL591212.2-201ENST00000433923 257 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.13□□□□□ -2.07
CLDN9O95484 AC004383.1-201ENST00000438135 289 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 IFNA11P-201ENST00000446352 526 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 HIGD1AP2-201ENST00000446367 280 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN9O95484 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.13□□□□□ -2.07
CLDN9O95484 SSXP1-201ENST00000453640 473 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.13□□□□□ -2.07
CLDN9O95484 AC080013.2-201ENST00000460866 323 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.13□□□□□ -2.07
CLDN9O95484 KLF3P2-201ENST00000465138 268 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.13□□□□□ -2.07
CLDN9O95484 AC132942.1-201ENST00000486753 483 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 RPL23AP49-201ENST00000492925 468 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN9O95484 AC107222.1-201ENST00000510899 637 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.13□□□□□ -2.07
CLDN9O95484 SMURF2P1-201ENST00000514992 481 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 RNA5SP200-201ENST00000516360 103 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 MIR892C-201ENST00000516410 77 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 RNU6-201P-201ENST00000517100 61 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 AC009902.1-201ENST00000519351 183 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 MTND2P32-201ENST00000521584 1038 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 MTND4LP18-201ENST00000526864 291 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN9O95484 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.13□□□□□ -2.07
CLDN9O95484 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN9O95484 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN9O95484 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN9O95484 MIR5694-201ENST00000581190 76 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 MIR7111-201ENST00000619751 72 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 MIR6132-201ENST00000622083 109 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 MTND5P42-201ENST00000637720 498 ntBASIC2.13□□□□□ -2.07
CLDN9O95484 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.13□□□□□ -2.07
CLDN9O95484 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLDN9O95484 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLDN9O95484 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CLDN9O95484 AC006020.1-201ENST00000420179 1854 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLDN9O95484 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.12□□□□□ -2.07
CLDN9O95484 RNU6-511P-201ENST00000363496 107 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 RNU6-1280P-201ENST00000365211 107 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 MIR524-201ENST00000385242 87 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 SNORA48.3-201ENST00000391081 134 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.12□□□□□ -2.07
CLDN9O95484 AC006366.1-201ENST00000422002 759 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.12□□□□□ -2.07
CLDN9O95484 AC007560.1-201ENST00000426912 237 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN9O95484 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.12□□□□□ -2.07
CLDN9O95484 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN9O95484 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN9O95484 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN9O95484 AL441985.1-201ENST00000457727 251 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.12□□□□□ -2.07
CLDN9O95484 AC108210.2-201ENST00000503681 201 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN9O95484 RNU1-41P-201ENST00000516161 162 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 RNU1-48P-201ENST00000516400 162 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 RNU6-677P-201ENST00000516914 101 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 SNORA31.19-201ENST00000517079 126 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 AC025755.1-201ENST00000521306 278 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 AC107934.1-201ENST00000522215 217 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN9O95484 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.12□□□□□ -2.07
CLDN9O95484 AC022893.3-201ENST00000607665 437 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 AC027449.1-201ENST00000608890 407 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 AL365204.3-201ENST00000612448 685 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 AC130324.3-201ENST00000614165 542 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 MIR6134-201ENST00000617606 109 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.12□□□□□ -2.07
CLDN9O95484 AC093591.3-201ENST00000634516 308 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 CU459211.1-201ENST00000635667 749 ntBASIC2.12□□□□□ -2.07
CLDN9O95484 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.12□□□□□ -2.07
CLDN9O95484 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CLDN9O95484 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN9O95484 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN9O95484 CDC27P3-201ENST00000635418 1910 ntBASIC2.11□□□□□ -2.07
CLDN9O95484 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.11□□□□□ -2.07
CLDN9O95484 SNORA3A-201ENST00000364113 130 ntBASIC2.11□□□□□ -2.07
CLDN9O95484 RNU6-898P-201ENST00000365627 104 ntBASIC2.11□□□□□ -2.07
CLDN9O95484 RNU6-190P-201ENST00000384154 102 ntBASIC2.11□□□□□ -2.07
CLDN9O95484 RNU6-748P-201ENST00000384648 107 ntBASIC2.11□□□□□ -2.07
CLDN9O95484 MIR301A-201ENST00000385261 86 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms