Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.52□□□□□ -1.69
RAPGEF3O95398 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RAPGEF3O95398 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.52□□□□□ -1.69
RAPGEF3O95398 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.52□□□□□ -1.69
RAPGEF3O95398 RN7SL93P-201ENST00000463035 293 ntBASIC4.52□□□□□ -1.69
RAPGEF3O95398 RBBP4P6-201ENST00000508098 202 ntBASIC4.52□□□□□ -1.69
RAPGEF3O95398 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.52□□□□□ -1.69
RAPGEF3O95398 RNU6-927P-201ENST00000516199 100 ntBASIC4.52□□□□□ -1.69
RAPGEF3O95398 AC087241.2-201ENST00000535801 324 ntBASIC4.52□□□□□ -1.69
RAPGEF3O95398 MED28P6-201ENST00000558776 231 ntBASIC4.52□□□□□ -1.69
RAPGEF3O95398 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.52□□□□□ -1.69
RAPGEF3O95398 AC025946.2-201ENST00000603398 234 ntBASIC4.52□□□□□ -1.69
RAPGEF3O95398 AC009248.2-201ENST00000619826 254 ntBASIC4.52□□□□□ -1.69
RAPGEF3O95398 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.52□□□□□ -1.69
RAPGEF3O95398 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAPGEF3O95398 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RAPGEF3O95398 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.51□□□□□ -1.69
RAPGEF3O95398 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RAPGEF3O95398 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
RAPGEF3O95398 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RAPGEF3O95398 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RAPGEF3O95398 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
RAPGEF3O95398 Y_RNA.615-201ENST00000410769 117 ntBASIC4.51□□□□□ -1.69
RAPGEF3O95398 RNA5SP39-201ENST00000411245 120 ntBASIC4.51□□□□□ -1.69
RAPGEF3O95398 AL591704.1-201ENST00000432574 275 ntBASIC4.51□□□□□ -1.69
RAPGEF3O95398 RPS20P22-201ENST00000473700 357 ntBASIC4.51□□□□□ -1.69
RAPGEF3O95398 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RAPGEF3O95398 AL359273.1-201ENST00000510918 627 ntBASIC4.51□□□□□ -1.69
RAPGEF3O95398 RNU6-123P-201ENST00000516163 102 ntBASIC4.51□□□□□ -1.69
RAPGEF3O95398 SNORA31.8-201ENST00000516327 108 ntBASIC4.51□□□□□ -1.69
RAPGEF3O95398 Y_RNA.689-201ENST00000516589 107 ntBASIC4.51□□□□□ -1.69
RAPGEF3O95398 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.51□□□□□ -1.69
RAPGEF3O95398 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.51□□□□□ -1.69
RAPGEF3O95398 AC009233.1-201ENST00000616477 371 ntBASIC4.51□□□□□ -1.69
RAPGEF3O95398 AC048347.1-201ENST00000624621 427 ntBASIC4.51□□□□□ -1.69
RAPGEF3O95398 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.51□□□□□ -1.69
RAPGEF3O95398 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.51□□□□□ -1.69
RAPGEF3O95398 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RAPGEF3O95398 MTND4P29-201ENST00000503122 1372 ntBASIC4.51□□□□□ -1.69
RAPGEF3O95398 MTND4P35-201ENST00000604257 1375 ntBASIC4.51□□□□□ -1.69
RAPGEF3O95398 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RAPGEF3O95398 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RAPGEF3O95398 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.5□□□□□ -1.69
RAPGEF3O95398 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RAPGEF3O95398 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.5□□□□□ -1.69
RAPGEF3O95398 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.5□□□□□ -1.69
RAPGEF3O95398 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RAPGEF3O95398 RNU6-522P-201ENST00000364497 107 ntBASIC4.5□□□□□ -1.69
RAPGEF3O95398 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RAPGEF3O95398 MIR514A1-201ENST00000385133 98 ntBASIC4.5□□□□□ -1.69
RAPGEF3O95398 AC080125.1-201ENST00000414888 684 ntBASIC4.5□□□□□ -1.69
RAPGEF3O95398 NCOR1P3-201ENST00000420479 303 ntBASIC4.5□□□□□ -1.69
RAPGEF3O95398 RPL27AP8-201ENST00000424277 446 ntBASIC4.5□□□□□ -1.69
RAPGEF3O95398 AL365400.1-201ENST00000431854 640 ntBASIC4.5□□□□□ -1.69
RAPGEF3O95398 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.5□□□□□ -1.69
RAPGEF3O95398 UBE2V1P7-201ENST00000446395 340 ntBASIC4.5□□□□□ -1.69
RAPGEF3O95398 AC087588.1-201ENST00000462203 316 ntBASIC4.5□□□□□ -1.69
RAPGEF3O95398 Y_RNA.654-201ENST00000497848 106 ntBASIC4.5□□□□□ -1.69
RAPGEF3O95398 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.5□□□□□ -1.69
RAPGEF3O95398 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.5□□□□□ -1.69
RAPGEF3O95398 DPPA3P3-201ENST00000603842 430 ntBASIC4.5□□□□□ -1.69
RAPGEF3O95398 AL670379.4-201ENST00000605279 254 ntBASIC4.5□□□□□ -1.69
RAPGEF3O95398 AP002826.1-201ENST00000608835 315 ntBASIC4.5□□□□□ -1.69
RAPGEF3O95398 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.5□□□□□ -1.69
RAPGEF3O95398 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RAPGEF3O95398 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RAPGEF3O95398 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RAPGEF3O95398 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RAPGEF3O95398 SNORD81.2-201ENST00000365153 76 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 Y_RNA.530-201ENST00000384587 101 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 RNU2-37P-201ENST00000410695 177 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 PDCL2P1-201ENST00000419302 352 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 TOMM20P4-201ENST00000427861 435 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 AL356867.1-201ENST00000429623 299 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 IFNA20P-201ENST00000436840 528 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 AC104058.1-201ENST00000448028 297 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 AL590639.1-201ENST00000456484 337 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 RNU6-1208P-201ENST00000459588 107 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 AP001086.1-201ENST00000494882 321 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 FGF7P4-201ENST00000509595 295 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.49□□□□□ -1.69
RAPGEF3O95398 Y_RNA.665-201ENST00000516177 98 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 RN7SKP256-201ENST00000517201 314 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.49□□□□□ -1.69
RAPGEF3O95398 AC024153.1-201ENST00000603103 365 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 AP001330.4-201ENST00000604350 154 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 AC087045.1-201ENST00000605856 382 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 AC012531.5-201ENST00000611375 151 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 uc_338.5-201ENST00000611839 155 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 MIR486-1-201ENST00000612171 68 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 AC034102.8-201ENST00000615146 484 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 AL359697.1-201ENST00000624879 587 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.49□□□□□ -1.69
RAPGEF3O95398 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.49□□□□□ -1.69
RAPGEF3O95398 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.49□□□□□ -1.69
RAPGEF3O95398 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RAPGEF3O95398 AC121333.1-201ENST00000567488 2709 ntBASIC4.49□□□□□ -1.69
RAPGEF3O95398 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.48□□□□□ -1.69
RAPGEF3O95398 RNU6-116P-201ENST00000384042 109 ntBASIC4.48□□□□□ -1.69
RAPGEF3O95398 MTND3P8-201ENST00000412909 339 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms