Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AL078601.1-201ENST00000444542 271 ntBASIC3.17□□□□□ -1.9
RTN3O95197 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.17□□□□□ -1.9
RTN3O95197 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.17□□□□□ -1.9
RTN3O95197 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.17□□□□□ -1.9
RTN3O95197 UQCRHP3-201ENST00000451503 251 ntBASIC3.17□□□□□ -1.9
RTN3O95197 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.17□□□□□ -1.9
RTN3O95197 RPL21P39-201ENST00000463605 483 ntBASIC3.17□□□□□ -1.9
RTN3O95197 RPL21P93-201ENST00000480465 489 ntBASIC3.17□□□□□ -1.9
RTN3O95197 AC087190.1-201ENST00000484462 480 ntBASIC3.17□□□□□ -1.9
RTN3O95197 AC093591.1-201ENST00000491435 481 ntBASIC3.17□□□□□ -1.9
RTN3O95197 RPL21P16-201ENST00000495531 483 ntBASIC3.17□□□□□ -1.9
RTN3O95197 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.17□□□□□ -1.9
RTN3O95197 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.17□□□□□ -1.9
RTN3O95197 AC108078.1-201ENST00000508073 725 ntBASIC3.17□□□□□ -1.9
RTN3O95197 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.17□□□□□ -1.9
RTN3O95197 RNU6-56P-201ENST00000516986 93 ntBASIC3.17□□□□□ -1.9
RTN3O95197 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.17□□□□□ -1.9
RTN3O95197 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.17□□□□□ -1.9
RTN3O95197 AC107016.2-201ENST00000547968 190 ntBASIC3.17□□□□□ -1.9
RTN3O95197 AC021739.1-201ENST00000559631 174 ntBASIC3.17□□□□□ -1.9
RTN3O95197 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.17□□□□□ -1.9
RTN3O95197 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RTN3O95197 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RTN3O95197 CKAP2P1-201ENST00000555477 2049 ntBASIC3.16□□□□□ -1.9
RTN3O95197 AC073325.2-201ENST00000339545 159 ntBASIC3.16□□□□□ -1.9
RTN3O95197 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.16□□□□□ -1.9
RTN3O95197 SNORD21-201ENST00000383953 95 ntBASIC3.16□□□□□ -1.9
RTN3O95197 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RTN3O95197 RNU6-750P-201ENST00000390946 107 ntBASIC3.16□□□□□ -1.9
RTN3O95197 RNA5SP274-201ENST00000410484 108 ntBASIC3.16□□□□□ -1.9
RTN3O95197 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.16□□□□□ -1.9
RTN3O95197 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.16□□□□□ -1.9
RTN3O95197 USP9YP14-201ENST00000430663 563 ntBASIC3.16□□□□□ -1.9
RTN3O95197 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.16□□□□□ -1.9
RTN3O95197 MTCO2P7-201ENST00000446518 666 ntBASIC3.16□□□□□ -1.9
RTN3O95197 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.16□□□□□ -1.9
RTN3O95197 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.16□□□□□ -1.9
RTN3O95197 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.16□□□□□ -1.9
RTN3O95197 AC117440.1-201ENST00000474107 571 ntBASIC3.16□□□□□ -1.9
RTN3O95197 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.16□□□□□ -1.9
RTN3O95197 RPL31P41-201ENST00000477967 372 ntBASIC3.16□□□□□ -1.9
RTN3O95197 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.16□□□□□ -1.9
RTN3O95197 RNA5SP503-201ENST00000517047 117 ntBASIC3.16□□□□□ -1.9
RTN3O95197 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.16□□□□□ -1.9
RTN3O95197 OR5BN1P-201ENST00000532955 829 ntBASIC3.16□□□□□ -1.9
RTN3O95197 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.16□□□□□ -1.9
RTN3O95197 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.16□□□□□ -1.9
RTN3O95197 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.16□□□□□ -1.9
RTN3O95197 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.16□□□□□ -1.9
RTN3O95197 MIR4775-201ENST00000581168 75 ntBASIC3.16□□□□□ -1.9
RTN3O95197 MIR548AC-201ENST00000585049 88 ntBASIC3.16□□□□□ -1.9
RTN3O95197 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.16□□□□□ -1.9
RTN3O95197 AC103591.3-201ENST00000608684 209 ntBASIC3.16□□□□□ -1.9
RTN3O95197 uc_338.11-201ENST00000619132 160 ntBASIC3.16□□□□□ -1.9
RTN3O95197 AC011155.2-201ENST00000623202 216 ntBASIC3.16□□□□□ -1.9
RTN3O95197 AL359740.1-201ENST00000624340 592 ntBASIC3.16□□□□□ -1.9
RTN3O95197 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.16□□□□□ -1.9
RTN3O95197 AL035425.3-201ENST00000564206 4996 ntBASIC3.16□□□□□ -1.9
RTN3O95197 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.16□□□□□ -1.9
RTN3O95197 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
RTN3O95197 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.15□□□□□ -1.9
RTN3O95197 RNU6-1287P-201ENST00000362914 107 ntBASIC3.15□□□□□ -1.91
RTN3O95197 RNU6-623P-201ENST00000363143 105 ntBASIC3.15□□□□□ -1.91
RTN3O95197 RNU6-851P-201ENST00000384565 107 ntBASIC3.15□□□□□ -1.91
RTN3O95197 RNU6-1060P-201ENST00000384664 107 ntBASIC3.15□□□□□ -1.91
RTN3O95197 UBE2V1P2-201ENST00000397758 440 ntBASIC3.15□□□□□ -1.91
RTN3O95197 OR51A5P-201ENST00000415429 942 ntBASIC3.15□□□□□ -1.91
RTN3O95197 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.15□□□□□ -1.91
RTN3O95197 AC010975.2-201ENST00000427781 588 ntBASIC3.15□□□□□ -1.91
RTN3O95197 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RTN3O95197 RPS15AP9-201ENST00000439856 381 ntBASIC3.15□□□□□ -1.91
RTN3O95197 AC104058.1-201ENST00000448028 297 ntBASIC3.15□□□□□ -1.91
RTN3O95197 RN7SL20P-201ENST00000488827 297 ntBASIC3.15□□□□□ -1.91
RTN3O95197 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.15□□□□□ -1.91
RTN3O95197 AC083906.5-201ENST00000503722 328 ntBASIC3.15□□□□□ -1.91
RTN3O95197 SEM1P1-201ENST00000506694 209 ntBASIC3.15□□□□□ -1.91
RTN3O95197 AC117522.3-201ENST00000507974 584 ntBASIC3.15□□□□□ -1.91
RTN3O95197 MRPS36P2-201ENST00000512569 299 ntBASIC3.15□□□□□ -1.91
RTN3O95197 SNORD19.2-201ENST00000516978 73 ntBASIC3.15□□□□□ -1.91
RTN3O95197 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RTN3O95197 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.15□□□□□ -1.91
RTN3O95197 CYCSP39-201ENST00000565821 309 ntBASIC3.15□□□□□ -1.91
RTN3O95197 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.15□□□□□ -1.91
RTN3O95197 AC010546.1-201ENST00000569391 485 ntBASIC3.15□□□□□ -1.91
RTN3O95197 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.15□□□□□ -1.91
RTN3O95197 AC103987.3-201ENST00000582071 292 ntBASIC3.15□□□□□ -1.91
RTN3O95197 AC010620.2-201ENST00000600135 313 ntBASIC3.15□□□□□ -1.91
RTN3O95197 DEFB131E-202ENST00000602581 683 ntBASIC3.15□□□□□ -1.91
RTN3O95197 AC025449.1-201ENST00000603896 529 ntBASIC3.15□□□□□ -1.91
RTN3O95197 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.15□□□□□ -1.91
RTN3O95197 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.15□□□□□ -1.91
RTN3O95197 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RTN3O95197 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RTN3O95197 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RTN3O95197 AC010889.1-201ENST00000566193 2666 ntBASIC3.15□□□□□ -1.91
RTN3O95197 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.14□□□□□ -1.91
RTN3O95197 Y_RNA.159-201ENST00000363674 87 ntBASIC3.14□□□□□ -1.91
RTN3O95197 RNU6-259P-201ENST00000383999 107 ntBASIC3.14□□□□□ -1.91
RTN3O95197 AL356057.2-201ENST00000403318 432 ntBASIC3.14□□□□□ -1.91
RTN3O95197 OR6C66P-201ENST00000414917 930 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms