Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AL590392.1-201ENST00000604960 446 ntBASIC4.71□□□□□ -1.66
PRPF40AO75400 AC114781.5-201ENST00000615297 108 ntBASIC4.71□□□□□ -1.66
PRPF40AO75400 AC004825.2-201ENST00000616634 455 ntBASIC4.71□□□□□ -1.66
PRPF40AO75400 AC119674.1-207ENST00000641355 633 ntBASIC4.71□□□□□ -1.66
PRPF40AO75400 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.71□□□□□ -1.66
PRPF40AO75400 AL158163.1-201ENST00000603915 1649 ntBASIC4.71□□□□□ -1.66
PRPF40AO75400 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.71□□□□□ -1.66
PRPF40AO75400 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
PRPF40AO75400 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF40AO75400 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF40AO75400 CDC27P3-201ENST00000635418 1910 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF40AO75400 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
PRPF40AO75400 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
PRPF40AO75400 AC007685.1-201ENST00000329806 452 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 Y_RNA.48-201ENST00000362710 103 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 Y_RNA.314-201ENST00000365114 102 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 RNU5E-7P-201ENST00000365290 117 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 Y_RNA.605-201ENST00000410577 105 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 AL117339.3-201ENST00000418733 162 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 RPL17P36-201ENST00000420302 549 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF40AO75400 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF40AO75400 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.7□□□□□ -1.66
PRPF40AO75400 SNRPEP4-201ENST00000435815 279 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.7□□□□□ -1.66
PRPF40AO75400 AC010618.1-201ENST00000469924 477 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 HMGN2P13-201ENST00000476476 274 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 FO393415.2-201ENST00000480085 343 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.7□□□□□ -1.66
PRPF40AO75400 AC114801.2-201ENST00000503825 781 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 AC022447.4-201ENST00000504053 364 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.7□□□□□ -1.66
PRPF40AO75400 RNU6-1282P-201ENST00000516735 96 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF40AO75400 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF40AO75400 TRAV8-5-201ENST00000537369 341 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.7□□□□□ -1.66
PRPF40AO75400 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.7□□□□□ -1.66
PRPF40AO75400 MIR3138-201ENST00000585238 82 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 AL355598.1-201ENST00000604169 202 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 ARF4P1-201ENST00000605447 541 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.7□□□□□ -1.66
PRPF40AO75400 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF40AO75400 FAM35BP-202ENST00000497389 3337 ntBASIC4.7□□□□□ -1.66
PRPF40AO75400 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
PRPF40AO75400 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
PRPF40AO75400 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF40AO75400 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.69□□□□□ -1.66
PRPF40AO75400 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF40AO75400 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF40AO75400 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.69□□□□□ -1.66
PRPF40AO75400 FTLP6-201ENST00000355274 422 ntBASIC4.69□□□□□ -1.66
PRPF40AO75400 U8.8-201ENST00000365399 135 ntBASIC4.69□□□□□ -1.66
PRPF40AO75400 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PRPF40AO75400 U3.42-201ENST00000408746 214 ntBASIC4.69□□□□□ -1.66
PRPF40AO75400 AL358472.1-201ENST00000431295 329 ntBASIC4.69□□□□□ -1.66
PRPF40AO75400 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF40AO75400 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.69□□□□□ -1.66
PRPF40AO75400 snoU109.2-201ENST00000459316 135 ntBASIC4.69□□□□□ -1.66
PRPF40AO75400 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.69□□□□□ -1.66
PRPF40AO75400 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.69□□□□□ -1.66
PRPF40AO75400 AL592156.1-201ENST00000508758 304 ntBASIC4.69□□□□□ -1.66
PRPF40AO75400 RNU6-377P-201ENST00000515965 102 ntBASIC4.69□□□□□ -1.66
PRPF40AO75400 RNA5SP49-201ENST00000516450 115 ntBASIC4.69□□□□□ -1.66
PRPF40AO75400 Y_RNA.687-201ENST00000516558 91 ntBASIC4.69□□□□□ -1.66
PRPF40AO75400 CBX3P8-201ENST00000532412 525 ntBASIC4.69□□□□□ -1.66
PRPF40AO75400 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.69□□□□□ -1.66
PRPF40AO75400 OR8R1P-201ENST00000543943 764 ntBASIC4.69□□□□□ -1.66
PRPF40AO75400 AC136624.4-201ENST00000573044 370 ntBASIC4.69□□□□□ -1.66
PRPF40AO75400 AC022655.2-201ENST00000577280 318 ntBASIC4.69□□□□□ -1.66
PRPF40AO75400 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.69□□□□□ -1.66
PRPF40AO75400 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.69□□□□□ -1.66
PRPF40AO75400 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.69□□□□□ -1.66
PRPF40AO75400 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.69□□□□□ -1.66
PRPF40AO75400 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
PRPF40AO75400 IPO8P1-201ENST00000455509 3109 ntBASIC4.69□□□□□ -1.66
PRPF40AO75400 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF40AO75400 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PRPF40AO75400 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF40AO75400 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
PRPF40AO75400 AC006504.1-201ENST00000562493 3666 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 RNY1P16-201ENST00000363063 111 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 SNORD35B-201ENST00000363660 87 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 Y_RNA.455-201ENST00000384230 98 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 AL591034.2-201ENST00000402839 359 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 RNU2-23P-201ENST00000410545 195 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 MRPS18CP6-201ENST00000423587 223 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 AC092017.2-201ENST00000427600 362 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 AC096644.2-201ENST00000429278 159 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 AL159987.2-201ENST00000432754 307 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF40AO75400 AC006011.1-201ENST00000442758 349 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.68□□□□□ -1.66
PRPF40AO75400 RN7SL691P-201ENST00000494487 301 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.68□□□□□ -1.66
PRPF40AO75400 AC105758.1-201ENST00000506038 399 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 IGKV2D-19-201ENST00000523346 262 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 AC008269.2-201ENST00000561915 1105 ntBASIC4.68□□□□□ -1.66
PRPF40AO75400 MIR3671-201ENST00000580455 88 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms