Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 SAR1AP2-201ENST00000392696 594 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PTCD1O75127 AC091286.1-201ENST00000431233 461 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-1037P-201ENST00000459571 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 HMGN1P11-201ENST00000508668 303 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 AC026726.1-201ENST00000512859 601 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU7-143P-201ENST00000516781 65 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU7-4P-201ENST00000516961 62 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCD1O75127 AC040926.1-201ENST00000530195 238 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 AC006600.1-201ENST00000572529 153 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 RNU6-6P-201ENST00000606623 107 ntBASIC5.18□□□□□ -1.58
PTCD1O75127 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCD1O75127 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.18□□□□□ -1.58
PTCD1O75127 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCD1O75127 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.18□□□□□ -1.58
PTCD1O75127 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.18□□□□□ -1.58
PTCD1O75127 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCD1O75127 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
PTCD1O75127 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTCD1O75127 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCD1O75127 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
PTCD1O75127 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCD1O75127 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCD1O75127 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCD1O75127 RPL9P7-201ENST00000330965 580 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 RNA5SP119-201ENST00000362715 117 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 RNU6-1317P-201ENST00000364582 104 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 EI24P1-201ENST00000416584 867 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 AL513043.1-201ENST00000439124 535 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 RPS3AP12-201ENST00000443616 753 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 AL139109.1-201ENST00000455491 297 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 RNA5SP103-201ENST00000459503 118 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 RPL9P9-202ENST00000466501 579 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 AC133134.1-201ENST00000466800 359 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 MED28P2-201ENST00000475771 317 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 PPIAP15-201ENST00000479662 484 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 RNU6-1256P-201ENST00000516539 103 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 Y_RNA.703-201ENST00000516846 111 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 AC084851.1-201ENST00000529105 249 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 CYCSP30-201ENST00000546447 172 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCD1O75127 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCD1O75127 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCD1O75127 AC127459.3-201ENST00000624328 466 ntBASIC5.17□□□□□ -1.58
PTCD1O75127 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCD1O75127 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTCD1O75127 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCD1O75127 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCD1O75127 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCD1O75127 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.16□□□□□ -1.58
PTCD1O75127 Y_RNA.20-201ENST00000362479 113 ntBASIC5.16□□□□□ -1.58
PTCD1O75127 RNU6-335P-201ENST00000364563 113 ntBASIC5.16□□□□□ -1.58
PTCD1O75127 Y_RNA.506-201ENST00000384494 102 ntBASIC5.16□□□□□ -1.58
PTCD1O75127 MIR521-1-201ENST00000384902 87 ntBASIC5.16□□□□□ -1.58
PTCD1O75127 MIR625-201ENST00000385047 85 ntBASIC5.16□□□□□ -1.58
PTCD1O75127 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PTCD1O75127 RNU2-33P-201ENST00000410344 192 ntBASIC5.16□□□□□ -1.58
PTCD1O75127 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.16□□□□□ -1.58
PTCD1O75127 MTCO3P8-201ENST00000453691 755 ntBASIC5.16□□□□□ -1.58
PTCD1O75127 AC133473.1-201ENST00000455173 299 ntBASIC5.16□□□□□ -1.58
PTCD1O75127 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.16□□□□□ -1.58
PTCD1O75127 SNORA40.14-201ENST00000516543 86 ntBASIC5.16□□□□□ -1.58
PTCD1O75127 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.16□□□□□ -1.58
PTCD1O75127 RPL21P7-201ENST00000557463 483 ntBASIC5.16□□□□□ -1.58
PTCD1O75127 AC009852.2-201ENST00000567898 485 ntBASIC5.16□□□□□ -1.58
PTCD1O75127 MIR3936-201ENST00000584304 110 ntBASIC5.16□□□□□ -1.58
PTCD1O75127 AC006363.1-201ENST00000603806 463 ntBASIC5.16□□□□□ -1.58
PTCD1O75127 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.16□□□□□ -1.58
PTCD1O75127 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.16□□□□□ -1.58
PTCD1O75127 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC5.16□□□□□ -1.58
PTCD1O75127 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PTCD1O75127 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
PTCD1O75127 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.15□□□□□ -1.58
PTCD1O75127 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PTCD1O75127 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTCD1O75127 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTCD1O75127 OR56A5-201ENST00000340110 738 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 RNU1-15P-201ENST00000353977 144 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 MIR412-201ENST00000362142 91 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 Y_RNA.29-201ENST00000362570 113 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 Y_RNA.105-201ENST00000363182 111 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 RNU6-280P-201ENST00000364145 104 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 Y_RNA.276-201ENST00000364732 109 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
PTCD1O75127 Y_RNA.533-201ENST00000384596 114 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 MIR7-3-201ENST00000384898 110 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.15□□□□□ -1.59
PTCD1O75127 TOMM20P4-201ENST00000427861 435 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 AC007919.1-201ENST00000429380 217 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 AL359273.1-201ENST00000510918 627 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.15□□□□□ -1.59
PTCD1O75127 SNORA25.11-201ENST00000515935 105 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 RNU1-95P-201ENST00000516357 160 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 SCARNA15.2-201ENST00000516409 127 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 RNU1-128P-201ENST00000516704 160 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PTCD1O75127 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.15□□□□□ -1.59
PTCD1O75127 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms