Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 Y_RNA.315-201ENST00000365117 102 ntBASIC3.08□□□□□ -1.92
LDB3O75112 SNORD42.2-201ENST00000365570 69 ntBASIC3.08□□□□□ -1.92
LDB3O75112 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.08□□□□□ -1.92
LDB3O75112 RNU6-946P-201ENST00000383878 107 ntBASIC3.08□□□□□ -1.92
LDB3O75112 RNU6-43P-201ENST00000384302 107 ntBASIC3.08□□□□□ -1.92
LDB3O75112 AL513331.1-201ENST00000411908 397 ntBASIC3.08□□□□□ -1.92
LDB3O75112 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.08□□□□□ -1.92
LDB3O75112 AL159169.1-201ENST00000421119 127 ntBASIC3.08□□□□□ -1.92
LDB3O75112 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.08□□□□□ -1.92
LDB3O75112 AL451062.2-201ENST00000427515 271 ntBASIC3.08□□□□□ -1.92
LDB3O75112 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.08□□□□□ -1.92
LDB3O75112 BRK1P2-201ENST00000442875 223 ntBASIC3.08□□□□□ -1.92
LDB3O75112 NEFMP1-201ENST00000443423 1006 ntBASIC3.08□□□□□ -1.92
LDB3O75112 MTND4P19-201ENST00000446659 478 ntBASIC3.08□□□□□ -1.92
LDB3O75112 AC006539.3-201ENST00000454258 129 ntBASIC3.08□□□□□ -1.92
LDB3O75112 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.08□□□□□ -1.92
LDB3O75112 AC091153.1-201ENST00000466297 402 ntBASIC3.08□□□□□ -1.92
LDB3O75112 AC034236.1-201ENST00000469891 373 ntBASIC3.08□□□□□ -1.92
LDB3O75112 RPL21P93-201ENST00000480465 489 ntBASIC3.08□□□□□ -1.92
LDB3O75112 AL049874.1-201ENST00000489560 388 ntBASIC3.08□□□□□ -1.92
LDB3O75112 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LDB3O75112 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.08□□□□□ -1.92
LDB3O75112 AC005741.1-201ENST00000511094 432 ntBASIC3.08□□□□□ -1.92
LDB3O75112 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.08□□□□□ -1.92
LDB3O75112 RNU6-327P-201ENST00000516270 127 ntBASIC3.08□□□□□ -1.92
LDB3O75112 ELOCP31-201ENST00000540463 467 ntBASIC3.08□□□□□ -1.92
LDB3O75112 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LDB3O75112 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LDB3O75112 HIGD1AP1-201ENST00000550979 275 ntBASIC3.08□□□□□ -1.92
LDB3O75112 SRGNP1-201ENST00000603392 451 ntBASIC3.08□□□□□ -1.92
LDB3O75112 AC116312.1-201ENST00000606841 314 ntBASIC3.08□□□□□ -1.92
LDB3O75112 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LDB3O75112 AC130324.3-201ENST00000614165 542 ntBASIC3.08□□□□□ -1.92
LDB3O75112 uc_338.15-201ENST00000615470 191 ntBASIC3.08□□□□□ -1.92
LDB3O75112 uc_338.11-201ENST00000619132 160 ntBASIC3.08□□□□□ -1.92
LDB3O75112 XIST_intron.1-201ENST00000619444 68 ntBASIC3.08□□□□□ -1.92
LDB3O75112 AC025034.2-201ENST00000623264 286 ntBASIC3.08□□□□□ -1.92
LDB3O75112 U6.114-201ENST00000636407 96 ntBASIC3.08□□□□□ -1.92
LDB3O75112 AC091152.2-201ENST00000591628 2569 ntBASIC3.08□□□□□ -1.92
LDB3O75112 AC007496.3-201ENST00000624987 3443 ntBASIC3.08□□□□□ -1.92
LDB3O75112 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.08□□□□□ -1.92
LDB3O75112 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LDB3O75112 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LDB3O75112 AC008568.2-201ENST00000623862 2313 ntBASIC3.07□□□□□ -1.92
LDB3O75112 RNU1-75P-201ENST00000347264 129 ntBASIC3.07□□□□□ -1.92
LDB3O75112 SNORA63C-201ENST00000364578 129 ntBASIC3.07□□□□□ -1.92
LDB3O75112 RNA5SP267-201ENST00000364893 126 ntBASIC3.07□□□□□ -1.92
LDB3O75112 Y_RNA.387-201ENST00000383918 102 ntBASIC3.07□□□□□ -1.92
LDB3O75112 MIR514A1-201ENST00000385133 98 ntBASIC3.07□□□□□ -1.92
LDB3O75112 RNU6-328P-201ENST00000390887 106 ntBASIC3.07□□□□□ -1.92
LDB3O75112 PTMAP5-201ENST00000393073 333 ntBASIC3.07□□□□□ -1.92
LDB3O75112 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LDB3O75112 RNU6-387P-201ENST00000411331 105 ntBASIC3.07□□□□□ -1.92
LDB3O75112 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.07□□□□□ -1.92
LDB3O75112 AL356867.1-201ENST00000429623 299 ntBASIC3.07□□□□□ -1.92
LDB3O75112 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.07□□□□□ -1.92
LDB3O75112 SNRPEP4-201ENST00000435815 279 ntBASIC3.07□□□□□ -1.92
LDB3O75112 CST9LP2-201ENST00000437612 320 ntBASIC3.07□□□□□ -1.92
LDB3O75112 AC012181.1-201ENST00000479895 423 ntBASIC3.07□□□□□ -1.92
LDB3O75112 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.07□□□□□ -1.92
LDB3O75112 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.07□□□□□ -1.92
LDB3O75112 RBBP4P6-201ENST00000508098 202 ntBASIC3.07□□□□□ -1.92
LDB3O75112 RNU6-864P-201ENST00000516256 108 ntBASIC3.07□□□□□ -1.92
LDB3O75112 Y_RNA.682-201ENST00000516457 100 ntBASIC3.07□□□□□ -1.92
LDB3O75112 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.07□□□□□ -1.92
LDB3O75112 RNA5SP503-201ENST00000517047 117 ntBASIC3.07□□□□□ -1.92
LDB3O75112 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.07□□□□□ -1.92
LDB3O75112 MIR4474-201ENST00000579189 78 ntBASIC3.07□□□□□ -1.92
LDB3O75112 DPPA3P3-201ENST00000603842 430 ntBASIC3.07□□□□□ -1.92
LDB3O75112 AC104763.2-201ENST00000604179 382 ntBASIC3.07□□□□□ -1.92
LDB3O75112 AC009570.1-201ENST00000609599 745 ntBASIC3.07□□□□□ -1.92
LDB3O75112 AC040896.1-201ENST00000613819 479 ntBASIC3.07□□□□□ -1.92
LDB3O75112 AP001486.3-201ENST00000615334 372 ntBASIC3.07□□□□□ -1.92
LDB3O75112 AC068831.7-201ENST00000616954 363 ntBASIC3.07□□□□□ -1.92
LDB3O75112 uc_338.34-201ENST00000617467 174 ntBASIC3.07□□□□□ -1.92
LDB3O75112 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.07□□□□□ -1.92
LDB3O75112 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LDB3O75112 CUL1P1-201ENST00000509510 2425 ntBASIC3.07□□□□□ -1.92
LDB3O75112 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LDB3O75112 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LDB3O75112 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LDB3O75112 Y_RNA.100-201ENST00000363141 102 ntBASIC3.06□□□□□ -1.92
LDB3O75112 Y_RNA.414-201ENST00000384011 101 ntBASIC3.06□□□□□ -1.92
LDB3O75112 MIR34B-201ENST00000385076 84 ntBASIC3.06□□□□□ -1.92
LDB3O75112 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LDB3O75112 API5P2-201ENST00000397055 1498 ntBASIC3.06□□□□□ -1.92
LDB3O75112 AL357075.1-201ENST00000404107 726 ntBASIC3.06□□□□□ -1.92
LDB3O75112 MIR548F5-201ENST00000408421 86 ntBASIC3.06□□□□□ -1.92
LDB3O75112 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.06□□□□□ -1.92
LDB3O75112 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.06□□□□□ -1.92
LDB3O75112 RPL31P12-201ENST00000422587 358 ntBASIC3.06□□□□□ -1.92
LDB3O75112 AC005326.1-201ENST00000429197 123 ntBASIC3.06□□□□□ -1.92
LDB3O75112 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.06□□□□□ -1.92
LDB3O75112 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.06□□□□□ -1.92
LDB3O75112 HMGN2P20-201ENST00000437531 273 ntBASIC3.06□□□□□ -1.92
LDB3O75112 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.06□□□□□ -1.92
LDB3O75112 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.06□□□□□ -1.92
LDB3O75112 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.06□□□□□ -1.92
LDB3O75112 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LDB3O75112 RNA5SP310-201ENST00000459084 116 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms