Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SHOX2O60902 RNU6-744P-201ENST00000365557 107 ntBASIC1.78□□□□□ -2.12
SHOX2O60902 Y_RNA.408-201ENST00000383987 102 ntBASIC1.78□□□□□ -2.12
SHOX2O60902 RNU6-1316P-201ENST00000384242 108 ntBASIC1.78□□□□□ -2.12
SHOX2O60902 POLHP1-201ENST00000411806 470 ntBASIC1.78□□□□□ -2.12
SHOX2O60902 PTGES3P4-201ENST00000426243 356 ntBASIC1.78□□□□□ -2.12
SHOX2O60902 AC244035.1-201ENST00000430042 390 ntBASIC1.78□□□□□ -2.12
SHOX2O60902 AC010153.1-201ENST00000432862 727 ntBASIC1.78□□□□□ -2.12
SHOX2O60902 GTF2IP3-201ENST00000433887 494 ntBASIC1.78□□□□□ -2.12
SHOX2O60902 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.78□□□□□ -2.12
SHOX2O60902 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.78□□□□□ -2.12
SHOX2O60902 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.78□□□□□ -2.12
SHOX2O60902 RNY4P37-201ENST00000516225 96 ntBASIC1.78□□□□□ -2.12
SHOX2O60902 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
SHOX2O60902 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.78□□□□□ -2.12
SHOX2O60902 GNAI2P1-201ENST00000541815 315 ntBASIC1.78□□□□□ -2.12
SHOX2O60902 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.78□□□□□ -2.12
SHOX2O60902 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.78□□□□□ -2.12
SHOX2O60902 AL354943.1-201ENST00000572103 781 ntBASIC1.78□□□□□ -2.12
SHOX2O60902 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.78□□□□□ -2.12
SHOX2O60902 MIR4529-201ENST00000578110 78 ntBASIC1.78□□□□□ -2.12
SHOX2O60902 AC005261.5-201ENST00000596280 355 ntBASIC1.78□□□□□ -2.12
SHOX2O60902 AL096840.1-201ENST00000603287 93 ntBASIC1.78□□□□□ -2.12
SHOX2O60902 AL512427.1-201ENST00000618593 349 ntBASIC1.78□□□□□ -2.12
SHOX2O60902 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.78□□□□□ -2.12
SHOX2O60902 AC244517.12-201ENST00000623581 663 ntBASIC1.78□□□□□ -2.12
SHOX2O60902 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SHOX2O60902 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.77□□□□□ -2.13
SHOX2O60902 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
SHOX2O60902 SNORA40.2-201ENST00000390847 128 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 RNU6-1140P-201ENST00000410517 106 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.77□□□□□ -2.13
SHOX2O60902 RPS15AP12-201ENST00000419498 388 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 AIMP1P2-201ENST00000425294 312 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.77□□□□□ -2.13
SHOX2O60902 AL591704.1-201ENST00000432574 275 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 RPL7P54-201ENST00000438336 674 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.77□□□□□ -2.13
SHOX2O60902 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.77□□□□□ -2.13
SHOX2O60902 AL441985.1-201ENST00000457727 251 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.77□□□□□ -2.13
SHOX2O60902 MTND4P2-201ENST00000507767 1203 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.77□□□□□ -2.13
SHOX2O60902 RNA5SP61-201ENST00000516453 100 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 AP003168.1-201ENST00000530091 307 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 AC093012.1-202ENST00000549403 582 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.77□□□□□ -2.13
SHOX2O60902 AC007375.1-201ENST00000554513 578 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.77□□□□□ -2.13
SHOX2O60902 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.77□□□□□ -2.13
SHOX2O60902 MTCYBP22-201ENST00000603788 447 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 AL138963.2-201ENST00000605137 226 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 AC090186.1-201ENST00000605991 572 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 AL627230.6-201ENST00000611129 280 ntBASIC1.77□□□□□ -2.13
SHOX2O60902 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.77□□□□□ -2.13
SHOX2O60902 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
SHOX2O60902 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.76□□□□□ -2.13
SHOX2O60902 RBBP8P1-201ENST00000449447 1844 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 RNA5SP240-201ENST00000365355 128 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.76□□□□□ -2.13
SHOX2O60902 U8.13-201ENST00000390842 128 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 AL021407.1-201ENST00000404531 386 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.76□□□□□ -2.13
SHOX2O60902 AP000275.1-201ENST00000411943 390 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 AL953862.1-201ENST00000423016 168 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.76□□□□□ -2.13
SHOX2O60902 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.76□□□□□ -2.13
SHOX2O60902 AL445646.1-201ENST00000431784 216 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 GPM6BP2-201ENST00000432046 144 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.76□□□□□ -2.13
SHOX2O60902 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.76□□□□□ -2.13
SHOX2O60902 GPM6BP1-201ENST00000446387 144 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 PAXBP1P1-201ENST00000449315 447 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.76□□□□□ -2.13
SHOX2O60902 AC117503.1-201ENST00000472241 394 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 AC093809.1-201ENST00000509155 340 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 AC107393.1-201ENST00000512403 346 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 RN7SKP258-201ENST00000517151 304 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.76□□□□□ -2.13
SHOX2O60902 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.76□□□□□ -2.13
SHOX2O60902 AC023538.1-201ENST00000534576 736 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 AC104581.2-201ENST00000572227 430 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 AC022662.1-201ENST00000580252 331 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 AL109918.3-201ENST00000603072 338 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 AL161798.1-201ENST00000604630 131 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 AC112220.2-201ENST00000605513 533 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 AC024060.1-201ENST00000607052 494 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 MIR6504-201ENST00000613520 61 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 AC007490.1-201ENST00000624321 703 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 ZNF355P-201ENST00000427301 3216 ntBASIC1.76□□□□□ -2.13
SHOX2O60902 AC008555.8-201ENST00000623602 2168 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SHOX2O60902 RPL21P24-201ENST00000413752 448 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 HMGN1P33-201ENST00000432945 451 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 AC009238.1-201ENST00000442165 424 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 AC009237.6-201ENST00000446969 424 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 FABP5P15-201ENST00000453566 214 ntBASIC1.75□□□□□ -2.13
SHOX2O60902 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.75□□□□□ -2.13
SHOX2O60902 AC005410.1-202ENST00000460347 485 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms