Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TRIM13O60858 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TRIM13O60858 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM13O60858 MAPK10-373ENST00000641983 6772 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 DDX10P1-201ENST00000448545 1933 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
TRIM13O60858 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM13O60858 Z82217.1-201ENST00000625157 8149 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM13O60858 Y_RNA.27-201ENST00000362540 103 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 RNU6-1249P-201ENST00000363237 111 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 Y_RNA.533-201ENST00000384596 114 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TRIM13O60858 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 RNU6-735P-201ENST00000410612 107 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 FAR2P2-201ENST00000413041 594 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM13O60858 AC006946.1-201ENST00000429106 328 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 AC091286.1-201ENST00000431233 461 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 AC087650.1-201ENST00000431445 468 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 AC073063.1-201ENST00000434352 607 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM13O60858 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM13O60858 AC010631.1-201ENST00000474150 156 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 AC087190.1-201ENST00000484462 480 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 AC107032.1-201ENST00000485945 480 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 RN7SL810P-201ENST00000493031 276 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM13O60858 AC113155.1-201ENST00000511141 769 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM13O60858 RNA5SP519-201ENST00000516480 119 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 RNU7-143P-201ENST00000516781 65 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.05□□□□□ -1.76
TRIM13O60858 AC022559.1-201ENST00000520905 205 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.05□□□□□ -1.76
TRIM13O60858 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM13O60858 AC107016.1-201ENST00000550463 337 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 GNRHR2P1-201ENST00000555315 631 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM13O60858 AMZ2P1-203ENST00000565833 850 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM13O60858 AC008962.1-201ENST00000605729 304 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 TUG1_2.1-201ENST00000614234 87 ntBASIC4.05□□□□□ -1.76
TRIM13O60858 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM13O60858 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM13O60858 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM13O60858 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TRIM13O60858 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM13O60858 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM13O60858 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
TRIM13O60858 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM13O60858 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM13O60858 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM13O60858 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
TRIM13O60858 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
TRIM13O60858 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM13O60858 Y_RNA.76-201ENST00000362931 109 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 Y_RNA.541-201ENST00000384640 113 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 MIR3074-201ENST00000384885 81 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 MIR129-1-201ENST00000384972 72 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 AL591034.2-201ENST00000402839 359 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 RNU6-325P-201ENST00000411132 105 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM13O60858 BX842559.1-201ENST00000419615 532 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 AL160275.3-201ENST00000423876 471 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM13O60858 RPL23AP1-201ENST00000428990 471 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 FTH1P6-201ENST00000430768 320 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 AC004866.2-201ENST00000438285 481 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM13O60858 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
TRIM13O60858 RPL12P3-201ENST00000440080 396 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 AC073264.2-201ENST00000448886 166 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 AL162389.1-201ENST00000449233 177 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 RPL21P104-201ENST00000464143 478 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 HMGN2P13-201ENST00000476476 274 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 AC109925.1-201ENST00000478069 331 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 RN7SL271P-201ENST00000487601 295 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 AC007686.1-201ENST00000488511 463 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 RN7SL691P-201ENST00000494487 301 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 AC074250.1-201ENST00000511117 192 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.04□□□□□ -1.76
TRIM13O60858 RNA5SP49-201ENST00000516450 115 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 RNU4-60P-201ENST00000517239 135 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 MIR4480-201ENST00000582492 71 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 AC067852.3-201ENST00000589177 561 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 AC073657.2-201ENST00000605661 303 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 AC007619.2-201ENST00000605743 379 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM13O60858 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM13O60858 FP236240.3-201ENST00000623061 327 ntBASIC4.04□□□□□ -1.76
TRIM13O60858 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM13O60858 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM13O60858 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM13O60858 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM13O60858 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM13O60858 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM13O60858 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM13O60858 ZNF299P-201ENST00000406845 1804 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 RNU6-1155P-201ENST00000363554 107 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms