Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 Y_RNA.70-201ENST00000362886 110 ntBASIC2.85□□□□□ -1.95
PRKNO60260 RNU6-1167P-201ENST00000363227 94 ntBASIC2.85□□□□□ -1.95
PRKNO60260 AL162578.1-201ENST00000406202 378 ntBASIC2.85□□□□□ -1.95
PRKNO60260 U3.42-201ENST00000408746 214 ntBASIC2.85□□□□□ -1.95
PRKNO60260 Y_RNA.615-201ENST00000410769 117 ntBASIC2.85□□□□□ -1.95
PRKNO60260 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.85□□□□□ -1.95
PRKNO60260 AC080125.1-201ENST00000414888 684 ntBASIC2.85□□□□□ -1.95
PRKNO60260 AL160275.3-201ENST00000423876 471 ntBASIC2.85□□□□□ -1.95
PRKNO60260 AL513185.2-201ENST00000425543 193 ntBASIC2.85□□□□□ -1.95
PRKNO60260 AL590383.1-201ENST00000428602 75 ntBASIC2.85□□□□□ -1.95
PRKNO60260 AL592045.1-201ENST00000429867 352 ntBASIC2.85□□□□□ -1.95
PRKNO60260 ERLEC1P1-201ENST00000433806 578 ntBASIC2.85□□□□□ -1.95
PRKNO60260 AC098614.3-201ENST00000438957 440 ntBASIC2.85□□□□□ -1.95
PRKNO60260 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.85□□□□□ -1.95
PRKNO60260 PIGFP3-201ENST00000441918 722 ntBASIC2.85□□□□□ -1.95
PRKNO60260 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.85□□□□□ -1.95
PRKNO60260 AC087588.1-201ENST00000462203 316 ntBASIC2.85□□□□□ -1.95
PRKNO60260 AP002884.2-201ENST00000471647 395 ntBASIC2.85□□□□□ -1.95
PRKNO60260 RPS20P22-201ENST00000473700 357 ntBASIC2.85□□□□□ -1.95
PRKNO60260 RPS29P2-201ENST00000479278 136 ntBASIC2.85□□□□□ -1.95
PRKNO60260 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.85□□□□□ -1.95
PRKNO60260 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.85□□□□□ -1.95
PRKNO60260 RNU6-914P-201ENST00000516749 109 ntBASIC2.85□□□□□ -1.95
PRKNO60260 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.85□□□□□ -1.95
PRKNO60260 AP000889.1-201ENST00000530968 660 ntBASIC2.85□□□□□ -1.95
PRKNO60260 AL137161.1-201ENST00000532231 390 ntBASIC2.85□□□□□ -1.95
PRKNO60260 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PRKNO60260 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.85□□□□□ -1.95
PRKNO60260 AC023050.3-201ENST00000541142 333 ntBASIC2.85□□□□□ -1.95
PRKNO60260 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.85□□□□□ -1.95
PRKNO60260 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.85□□□□□ -1.95
PRKNO60260 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.85□□□□□ -1.95
PRKNO60260 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.85□□□□□ -1.95
PRKNO60260 AL591516.1-201ENST00000611326 274 ntBASIC2.85□□□□□ -1.95
PRKNO60260 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.85□□□□□ -1.95
PRKNO60260 AP003122.6-201ENST00000623831 495 ntBASIC2.85□□□□□ -1.95
PRKNO60260 MIR7153-201ENST00000637758 57 ntBASIC2.85□□□□□ -1.95
PRKNO60260 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.85□□□□□ -1.95
PRKNO60260 MTND4P35-201ENST00000604257 1375 ntBASIC2.85□□□□□ -1.95
PRKNO60260 MAPK10-362ENST00000641864 4484 ntBASIC2.85□□□□□ -1.95
PRKNO60260 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
PRKNO60260 MIR514A2-201ENST00000385131 88 ntBASIC2.84□□□□□ -1.95
PRKNO60260 MIR514A3-201ENST00000385132 88 ntBASIC2.84□□□□□ -1.95
PRKNO60260 Z92545.1-201ENST00000411782 234 ntBASIC2.84□□□□□ -1.95
PRKNO60260 SRIP2-201ENST00000428470 166 ntBASIC2.84□□□□□ -1.95
PRKNO60260 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.84□□□□□ -1.95
PRKNO60260 RPS12P18-201ENST00000442381 270 ntBASIC2.84□□□□□ -1.95
PRKNO60260 AC009237.8-201ENST00000445492 379 ntBASIC2.84□□□□□ -1.95
PRKNO60260 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.84□□□□□ -1.95
PRKNO60260 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.84□□□□□ -1.95
PRKNO60260 PMCHL2-203ENST00000457791 237 ntBASIC2.84□□□□□ -1.95
PRKNO60260 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.84□□□□□ -1.95
PRKNO60260 SCARNA18-201ENST00000459004 134 ntBASIC2.84□□□□□ -1.95
PRKNO60260 HMGN2P26-201ENST00000463169 339 ntBASIC2.84□□□□□ -1.95
PRKNO60260 S100A11P2-201ENST00000467589 312 ntBASIC2.84□□□□□ -1.95
PRKNO60260 RPL27AP5-201ENST00000469428 449 ntBASIC2.84□□□□□ -1.95
PRKNO60260 TRBV1-201ENST00000476502 284 ntBASIC2.84□□□□□ -1.95
PRKNO60260 KC877373.1-201ENST00000479066 408 ntBASIC2.84□□□□□ -1.95
PRKNO60260 RN7SL20P-201ENST00000488827 297 ntBASIC2.84□□□□□ -1.95
PRKNO60260 CCDC34P1-201ENST00000507441 517 ntBASIC2.84□□□□□ -1.95
PRKNO60260 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.84□□□□□ -1.95
PRKNO60260 RNA5SP217-201ENST00000515959 91 ntBASIC2.84□□□□□ -1.95
PRKNO60260 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.84□□□□□ -1.95
PRKNO60260 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.84□□□□□ -1.95
PRKNO60260 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.84□□□□□ -1.95
PRKNO60260 BNIP3P6-201ENST00000549284 499 ntBASIC2.84□□□□□ -1.95
PRKNO60260 AC078814.3-201ENST00000553036 491 ntBASIC2.84□□□□□ -1.95
PRKNO60260 AL118558.2-201ENST00000556294 238 ntBASIC2.84□□□□□ -1.95
PRKNO60260 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.84□□□□□ -1.95
PRKNO60260 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.84□□□□□ -1.95
PRKNO60260 AC018638.8-201ENST00000588755 281 ntBASIC2.84□□□□□ -1.95
PRKNO60260 AL161798.1-201ENST00000604630 131 ntBASIC2.84□□□□□ -1.95
PRKNO60260 AL110115.1-201ENST00000614396 364 ntBASIC2.84□□□□□ -1.95
PRKNO60260 AC007318.2-201ENST00000620999 243 ntBASIC2.84□□□□□ -1.95
PRKNO60260 AL512643.1-201ENST00000635735 524 ntBASIC2.84□□□□□ -1.95
PRKNO60260 MIR622-201ENST00000638396 96 ntBASIC2.84□□□□□ -1.95
PRKNO60260 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.84□□□□□ -1.95
PRKNO60260 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PRKNO60260 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
PRKNO60260 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.96
PRKNO60260 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.84□□□□□ -1.96
PRKNO60260 HSPA8P4-201ENST00000511877 1920 ntBASIC2.83□□□□□ -1.96
PRKNO60260 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.83□□□□□ -1.96
PRKNO60260 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PRKNO60260 AC073325.2-201ENST00000339545 159 ntBASIC2.83□□□□□ -1.96
PRKNO60260 MIR22-201ENST00000362190 85 ntBASIC2.83□□□□□ -1.96
PRKNO60260 Y_RNA.279-201ENST00000364763 95 ntBASIC2.83□□□□□ -1.96
PRKNO60260 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.83□□□□□ -1.96
PRKNO60260 RNU6-741P-201ENST00000383889 107 ntBASIC2.83□□□□□ -1.96
PRKNO60260 SNORA32.2-201ENST00000384049 122 ntBASIC2.83□□□□□ -1.96
PRKNO60260 RNU6-1127P-201ENST00000384580 107 ntBASIC2.83□□□□□ -1.96
PRKNO60260 MIR325-201ENST00000385260 98 ntBASIC2.83□□□□□ -1.96
PRKNO60260 RNU6-1197P-201ENST00000391183 107 ntBASIC2.83□□□□□ -1.96
PRKNO60260 AL592114.1-201ENST00000403842 483 ntBASIC2.83□□□□□ -1.96
PRKNO60260 RNU4-26P-201ENST00000410270 107 ntBASIC2.83□□□□□ -1.96
PRKNO60260 RN7SKP220-201ENST00000410611 288 ntBASIC2.83□□□□□ -1.96
PRKNO60260 EEF1A1P40-201ENST00000412883 573 ntBASIC2.83□□□□□ -1.96
PRKNO60260 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.83□□□□□ -1.96
PRKNO60260 AC092573.2-201ENST00000434546 243 ntBASIC2.83□□□□□ -1.96
PRKNO60260 TAAR7P-201ENST00000436141 242 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms