Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.34□□□□□ -2.19
SSNA1O43805 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.34□□□□□ -2.19
SSNA1O43805 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.34□□□□□ -2.19
SSNA1O43805 AC096577.2-201ENST00000611455 153 ntBASIC1.34□□□□□ -2.19
SSNA1O43805 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.34□□□□□ -2.19
SSNA1O43805 AC068880.4-201ENST00000623082 495 ntBASIC1.34□□□□□ -2.19
SSNA1O43805 AP003485.2-201ENST00000623636 610 ntBASIC1.34□□□□□ -2.19
SSNA1O43805 AC006386.2-201ENST00000624491 75 ntBASIC1.34□□□□□ -2.19
SSNA1O43805 AC012005.1-201ENST00000624575 75 ntBASIC1.34□□□□□ -2.19
SSNA1O43805 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.34□□□□□ -2.2
SSNA1O43805 MTND5P10-201ENST00000603719 1809 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.33□□□□□ -2.2
SSNA1O43805 SNORD14D-201ENST00000384390 87 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 MIR128-1-201ENST00000384921 82 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 MIR30A-201ENST00000385092 71 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 SNORA48.7-201ENST00000391302 135 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 RNU6-1140P-201ENST00000410517 106 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 RN7SKP51-201ENST00000410781 304 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.33□□□□□ -2.2
SSNA1O43805 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC1.33□□□□□ -2.2
SSNA1O43805 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.33□□□□□ -2.2
SSNA1O43805 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.33□□□□□ -2.2
SSNA1O43805 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.33□□□□□ -2.2
SSNA1O43805 PRELID3BP1-201ENST00000457142 540 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 AC114801.2-201ENST00000503825 781 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 FAM92A1P2-202ENST00000504766 877 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.33□□□□□ -2.2
SSNA1O43805 MTCO3P27-201ENST00000514397 196 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 RNU6-64P-201ENST00000517119 105 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.33□□□□□ -2.2
SSNA1O43805 EEF1A1P37-201ENST00000522748 715 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.33□□□□□ -2.2
SSNA1O43805 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.33□□□□□ -2.2
SSNA1O43805 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.33□□□□□ -2.2
SSNA1O43805 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.33□□□□□ -2.2
SSNA1O43805 MIR1254-2-201ENST00000579553 63 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 MIR4293-201ENST00000584305 78 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.33□□□□□ -2.2
SSNA1O43805 AC004987.4-201ENST00000603383 338 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.33□□□□□ -2.2
SSNA1O43805 AC090970.3-201ENST00000612566 866 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 AL512506.1-201ENST00000613918 449 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 PCMTD1P7-201ENST00000634506 357 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.33□□□□□ -2.2
SSNA1O43805 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SSNA1O43805 RNU6-1164P-201ENST00000364428 107 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 FTH1P15-201ENST00000406984 280 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 AC074117.2-201ENST00000417130 397 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 AC006946.1-201ENST00000429106 328 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 AL356320.1-201ENST00000429616 163 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 SNRPEP7-201ENST00000438350 220 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 BTBD7P2-201ENST00000441962 620 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 EEF1E1P1-201ENST00000446998 430 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 RNU7-59P-201ENST00000459101 61 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 AC106872.3-201ENST00000495104 446 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 RPL38P4-201ENST00000502376 214 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 AP003392.2-201ENST00000527269 208 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
SSNA1O43805 AC135279.1-201ENST00000543493 504 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.32□□□□□ -2.2
SSNA1O43805 ARL2BPP2-201ENST00000550907 489 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.32□□□□□ -2.2
SSNA1O43805 AC073410.2-201ENST00000603240 332 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 AL033523.1-201ENST00000605153 153 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.32□□□□□ -2.2
SSNA1O43805 MIR7974-201ENST00000615835 79 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 U1.36-201ENST00000620684 176 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 AL136313.1-201ENST00000624804 202 ntBASIC1.32□□□□□ -2.2
SSNA1O43805 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.32□□□□□ -2.2
SSNA1O43805 ZNF876P-202ENST00000398732 1485 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
SSNA1O43805 SNORD114-19-201ENST00000363072 75 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
SSNA1O43805 RNU6-1274P-201ENST00000384557 107 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 RNU6-14P-201ENST00000384630 106 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 MIR9-3-201ENST00000385084 90 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 AL033519.2-201ENST00000403958 392 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.31□□□□□ -2.2
SSNA1O43805 RNA5SP425-201ENST00000410336 112 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 RNU2-32P-201ENST00000411193 191 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.31□□□□□ -2.2
SSNA1O43805 USP9YP21-201ENST00000420603 432 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.31□□□□□ -2.2
SSNA1O43805 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.31□□□□□ -2.2
SSNA1O43805 VN1R108P-201ENST00000431580 830 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 AP000542.1-201ENST00000448473 371 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.31□□□□□ -2.2
SSNA1O43805 AC069528.1-202ENST00000482888 637 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 RPL9P6-201ENST00000492764 598 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 MTND4P2-201ENST00000507767 1203 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SSNA1O43805 RNU2-53P-201ENST00000516257 147 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 SNORA31.19-201ENST00000517079 126 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.31□□□□□ -2.2
SSNA1O43805 AP006587.4-201ENST00000526053 529 ntBASIC1.31□□□□□ -2.2
SSNA1O43805 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.31□□□□□ -2.2
SSNA1O43805 MIR4444-1-201ENST00000581696 74 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms