Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PHGDHO43175 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PHGDHO43175 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.53□□□□□ -1.84
PHGDHO43175 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
PHGDHO43175 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.53□□□□□ -1.85
PHGDHO43175 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.52□□□□□ -1.85
PHGDHO43175 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PHGDHO43175 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
PHGDHO43175 AC007823.1-201ENST00000569932 1566 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PHGDHO43175 Y_RNA.184-201ENST00000363884 108 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 Y_RNA.301-201ENST00000364990 103 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 Y_RNA.356-201ENST00000365475 113 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.52□□□□□ -1.85
PHGDHO43175 U8.11-201ENST00000384699 133 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 U8.12-201ENST00000384701 133 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 RNA5SP252-201ENST00000391131 119 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.52□□□□□ -1.85
PHGDHO43175 DBIP2-201ENST00000419076 262 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 RPL7P2-201ENST00000427639 268 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PHGDHO43175 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.52□□□□□ -1.85
PHGDHO43175 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.52□□□□□ -1.85
PHGDHO43175 U8.18-201ENST00000459285 133 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 AC104472.2-201ENST00000469035 601 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 AC034236.1-201ENST00000469891 373 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 RPS27AP10-201ENST00000496103 208 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.52□□□□□ -1.85
PHGDHO43175 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.52□□□□□ -1.85
PHGDHO43175 RNU2-27P-201ENST00000516185 142 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 SNORA70.18-201ENST00000516696 98 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.52□□□□□ -1.85
PHGDHO43175 AC026333.2-201ENST00000542164 106 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.52□□□□□ -1.85
PHGDHO43175 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.52□□□□□ -1.85
PHGDHO43175 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.52□□□□□ -1.85
PHGDHO43175 MIR3672-201ENST00000584290 82 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.52□□□□□ -1.85
PHGDHO43175 PLCE1P1-201ENST00000622094 305 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 AC022140.2-201ENST00000623500 188 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.52□□□□□ -1.85
PHGDHO43175 AL133216.2-202ENST00000634512 349 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 AC112487.2-201ENST00000637950 304 ntBASIC3.52□□□□□ -1.85
PHGDHO43175 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PHGDHO43175 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PHGDHO43175 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PHGDHO43175 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.52□□□□□ -1.85
PHGDHO43175 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.52□□□□□ -1.85
PHGDHO43175 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PHGDHO43175 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PHGDHO43175 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PHGDHO43175 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PHGDHO43175 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PHGDHO43175 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.51□□□□□ -1.85
PHGDHO43175 RNA5SP51-201ENST00000364750 119 ntBASIC3.51□□□□□ -1.85
PHGDHO43175 Y_RNA.529-201ENST00000384586 119 ntBASIC3.51□□□□□ -1.85
PHGDHO43175 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.51□□□□□ -1.85
PHGDHO43175 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.51□□□□□ -1.85
PHGDHO43175 AC017079.2-201ENST00000416102 485 ntBASIC3.51□□□□□ -1.85
PHGDHO43175 AC017083.1-201ENST00000428093 483 ntBASIC3.51□□□□□ -1.85
PHGDHO43175 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.51□□□□□ -1.85
PHGDHO43175 SETP5-201ENST00000437270 562 ntBASIC3.51□□□□□ -1.85
PHGDHO43175 HMGB1P18-201ENST00000438801 619 ntBASIC3.51□□□□□ -1.85
PHGDHO43175 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.51□□□□□ -1.85
PHGDHO43175 snoU109.2-201ENST00000459316 135 ntBASIC3.51□□□□□ -1.85
PHGDHO43175 RNU6-1088P-201ENST00000516850 104 ntBASIC3.51□□□□□ -1.85
PHGDHO43175 NACAP3-201ENST00000552100 481 ntBASIC3.51□□□□□ -1.85
PHGDHO43175 TGIF1P1-201ENST00000558095 802 ntBASIC3.51□□□□□ -1.85
PHGDHO43175 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.51□□□□□ -1.85
PHGDHO43175 LINC00933-203ENST00000559812 219 ntBASIC3.51□□□□□ -1.85
PHGDHO43175 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.51□□□□□ -1.85
PHGDHO43175 RPS3AP23-202ENST00000574601 686 ntBASIC3.51□□□□□ -1.85
PHGDHO43175 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.51□□□□□ -1.85
PHGDHO43175 HMGN2P15-201ENST00000585707 270 ntBASIC3.51□□□□□ -1.85
PHGDHO43175 uc_338.15-201ENST00000615470 191 ntBASIC3.51□□□□□ -1.85
PHGDHO43175 U4.6-201ENST00000621618 127 ntBASIC3.51□□□□□ -1.85
PHGDHO43175 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PHGDHO43175 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.51□□□□□ -1.85
PHGDHO43175 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PHGDHO43175 AC073544.1-201ENST00000600110 1595 ntBASIC3.51□□□□□ -1.85
PHGDHO43175 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PHGDHO43175 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PHGDHO43175 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.5□□□□□ -1.85
PHGDHO43175 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.5□□□□□ -1.85
PHGDHO43175 MIR30E-201ENST00000362104 92 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 RNU6-694P-201ENST00000364071 147 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 RNU1-64P-201ENST00000365443 163 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 Z98749.2-208ENST00000381646 500 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 RNU6-128P-201ENST00000383976 107 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 MT-TD-201ENST00000387419 68 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.5□□□□□ -1.85
PHGDHO43175 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.5□□□□□ -1.85
PHGDHO43175 AL359672.1-201ENST00000442302 409 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.5□□□□□ -1.85
PHGDHO43175 AC006539.3-201ENST00000454258 129 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 AC233279.1-201ENST00000455300 423 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 BTF3P15-201ENST00000455606 336 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 AMD1P1-201ENST00000457220 922 ntBASIC3.5□□□□□ -1.85
PHGDHO43175 RNU7-170P-201ENST00000459303 61 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms