Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RN7SKP82-201ENST00000516786 223 ntBASIC3.99□□□□□ -1.77
FOXN1O15353 RNU6-1213P-201ENST00000517075 94 ntBASIC3.99□□□□□ -1.77
FOXN1O15353 AP000857.1-201ENST00000532151 543 ntBASIC3.99□□□□□ -1.77
FOXN1O15353 AP000763.2-201ENST00000540641 163 ntBASIC3.99□□□□□ -1.77
FOXN1O15353 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXN1O15353 AC067852.3-201ENST00000589177 561 ntBASIC3.99□□□□□ -1.77
FOXN1O15353 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.99□□□□□ -1.77
FOXN1O15353 AC006557.5-201ENST00000603126 811 ntBASIC3.99□□□□□ -1.77
FOXN1O15353 AC245517.5-201ENST00000611529 162 ntBASIC3.99□□□□□ -1.77
FOXN1O15353 AL157817.1-201ENST00000614264 790 ntBASIC3.99□□□□□ -1.77
FOXN1O15353 HMGB1P24-202ENST00000615653 685 ntBASIC3.99□□□□□ -1.77
FOXN1O15353 AC007485.1-201ENST00000616755 206 ntBASIC3.99□□□□□ -1.77
FOXN1O15353 uc_338.34-201ENST00000617467 174 ntBASIC3.99□□□□□ -1.77
FOXN1O15353 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.99□□□□□ -1.77
FOXN1O15353 CYP3A51P-201ENST00000633513 256 ntBASIC3.99□□□□□ -1.77
FOXN1O15353 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXN1O15353 AC011460.1-201ENST00000636268 1834 ntBASIC3.99□□□□□ -1.77
FOXN1O15353 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXN1O15353 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FOXN1O15353 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FOXN1O15353 MAPK10-373ENST00000641983 6772 ntBASIC3.99□□□□□ -1.77
FOXN1O15353 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXN1O15353 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXN1O15353 MTND5P28-201ENST00000438005 1594 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 OTUD4P1-201ENST00000237841 3067 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXN1O15353 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FOXN1O15353 MIR30E-201ENST00000362104 92 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 RNU6-1115P-201ENST00000362490 106 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 Y_RNA.176-201ENST00000363815 109 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 SET-203ENST00000372688 801 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXN1O15353 RNU6-310P-201ENST00000384655 107 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FOXN1O15353 AL139397.2-201ENST00000404529 772 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 AL024474.1-201ENST00000404655 591 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 AL603908.1-201ENST00000406098 201 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 RNU6-847P-201ENST00000411115 108 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXN1O15353 HMGN1P24-201ENST00000412282 298 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 MED13P1-201ENST00000428342 171 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 RPL23AP69-201ENST00000431134 458 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 AC108734.1-201ENST00000439549 399 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.98□□□□□ -1.77
FOXN1O15353 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXN1O15353 EEF1B2P7-201ENST00000451177 676 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 SUMO1P2-201ENST00000452524 304 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 ANP32BP2-201ENST00000454525 545 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 RPL12P25-201ENST00000455592 494 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 AL162395.1-201ENST00000457882 422 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 TRBV1-201ENST00000476502 284 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 RNU6-579P-201ENST00000516879 102 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 AC022790.1-201ENST00000522872 204 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 MTND4P7-201ENST00000523876 130 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXN1O15353 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXN1O15353 MYL12BP1-201ENST00000569826 507 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.98□□□□□ -1.77
FOXN1O15353 MIR4703-201ENST00000577728 79 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 AC012409.4-201ENST00000612923 249 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 uc_338.11-201ENST00000619132 160 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 AL162373.1-201ENST00000620433 407 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXN1O15353 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXN1O15353 AL139811.1-201ENST00000424779 2299 ntBASIC3.98□□□□□ -1.77
FOXN1O15353 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXN1O15353 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXN1O15353 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXN1O15353 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXN1O15353 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 RNU6-97P-201ENST00000363387 104 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 Y_RNA.135-201ENST00000363439 95 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 U3.11-201ENST00000364476 212 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 Y_RNA.482-201ENST00000384377 111 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 Y_RNA.646-201ENST00000410980 101 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 RNU6-954P-201ENST00000411355 107 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXN1O15353 AC096644.2-201ENST00000429278 159 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXN1O15353 IFNWP4-201ENST00000453148 294 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 SNRPFP3-201ENST00000457792 225 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 snoU13.7-201ENST00000459220 104 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 snoU13.26-201ENST00000459452 105 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 AC109925.1-201ENST00000478069 331 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 Y_RNA.654-201ENST00000497848 106 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
FOXN1O15353 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.97□□□□□ -1.77
FOXN1O15353 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXN1O15353 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXN1O15353 RNU6-256P-201ENST00000516747 97 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 MIR2276-201ENST00000516886 89 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 RNA5SP503-201ENST00000517047 117 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 HMGB1P41-201ENST00000520234 440 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FOXN1O15353 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.97□□□□□ -1.77
FOXN1O15353 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXN1O15353 AL390240.1-201ENST00000612950 384 ntBASIC3.97□□□□□ -1.77
FOXN1O15353 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXN1O15353 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.97□□□□□ -1.77
FOXN1O15353 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms