Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RNU6-757P-201ENST00000410334 100 ntBASIC1.98□□□□□ -2.09
LSM1O15116 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.98□□□□□ -2.09
LSM1O15116 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.98□□□□□ -2.09
LSM1O15116 RPL31P63-201ENST00000422565 375 ntBASIC1.98□□□□□ -2.09
LSM1O15116 HMGN2P19-201ENST00000425149 265 ntBASIC1.98□□□□□ -2.09
LSM1O15116 AL591704.1-201ENST00000432574 275 ntBASIC1.98□□□□□ -2.09
LSM1O15116 HMGB3P12-201ENST00000438745 556 ntBASIC1.98□□□□□ -2.09
LSM1O15116 AC107032.1-201ENST00000485945 480 ntBASIC1.98□□□□□ -2.09
LSM1O15116 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.98□□□□□ -2.09
LSM1O15116 RNU5B-3P-201ENST00000516601 115 ntBASIC1.98□□□□□ -2.09
LSM1O15116 RNU6-678P-201ENST00000516832 109 ntBASIC1.98□□□□□ -2.09
LSM1O15116 RNA5SP137-201ENST00000516833 135 ntBASIC1.98□□□□□ -2.09
LSM1O15116 AC013828.2-201ENST00000532487 235 ntBASIC1.98□□□□□ -2.09
LSM1O15116 LINC00933-203ENST00000559812 219 ntBASIC1.98□□□□□ -2.09
LSM1O15116 AL356432.3-201ENST00000568952 465 ntBASIC1.98□□□□□ -2.09
LSM1O15116 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.98□□□□□ -2.09
LSM1O15116 MIR3122-201ENST00000577243 73 ntBASIC1.98□□□□□ -2.09
LSM1O15116 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.98□□□□□ -2.09
LSM1O15116 AC034229.4-201ENST00000607861 441 ntBASIC1.98□□□□□ -2.09
LSM1O15116 AL157392.4-201ENST00000609756 345 ntBASIC1.98□□□□□ -2.09
LSM1O15116 AL365204.3-201ENST00000612448 685 ntBASIC1.98□□□□□ -2.09
LSM1O15116 MIR5739-201ENST00000619803 80 ntBASIC1.98□□□□□ -2.09
LSM1O15116 MTND5P42-201ENST00000637720 498 ntBASIC1.98□□□□□ -2.09
LSM1O15116 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
LSM1O15116 AC103710.2-202ENST00000641454 2853 ntBASIC1.97□□□□□ -2.09
LSM1O15116 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
LSM1O15116 AP006437.1-201ENST00000641440 3685 ntBASIC1.97□□□□□ -2.09
LSM1O15116 RNA5SP88-201ENST00000365560 109 ntBASIC1.97□□□□□ -2.09
LSM1O15116 SMIM11P1-201ENST00000369586 178 ntBASIC1.97□□□□□ -2.09
LSM1O15116 UBE2V1P2-201ENST00000397758 440 ntBASIC1.97□□□□□ -2.09
LSM1O15116 RNU2-63P-201ENST00000410792 194 ntBASIC1.97□□□□□ -2.09
LSM1O15116 AC127391.1-201ENST00000411737 98 ntBASIC1.97□□□□□ -2.09
LSM1O15116 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.97□□□□□ -2.09
LSM1O15116 AL139156.1-201ENST00000412785 841 ntBASIC1.97□□□□□ -2.09
LSM1O15116 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.97□□□□□ -2.09
LSM1O15116 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.97□□□□□ -2.09
LSM1O15116 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.97□□□□□ -2.09
LSM1O15116 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.97□□□□□ -2.09
LSM1O15116 AL356320.1-201ENST00000429616 163 ntBASIC1.97□□□□□ -2.09
LSM1O15116 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.97□□□□□ -2.09
LSM1O15116 AC084290.1-201ENST00000434995 374 ntBASIC1.97□□□□□ -2.09
LSM1O15116 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.97□□□□□ -2.09
LSM1O15116 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.97□□□□□ -2.09
LSM1O15116 PTENP1-201ENST00000447117 1215 ntBASIC1.97□□□□□ -2.09
LSM1O15116 USP9YP25-201ENST00000457708 443 ntBASIC1.97□□□□□ -2.09
LSM1O15116 AC018868.1-201ENST00000491307 315 ntBASIC1.97□□□□□ -2.09
LSM1O15116 RNU6-572P-201ENST00000516724 80 ntBASIC1.97□□□□□ -2.09
LSM1O15116 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LSM1O15116 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.97□□□□□ -2.09
LSM1O15116 MIR3126-201ENST00000577443 74 ntBASIC1.97□□□□□ -2.09
LSM1O15116 MIR4782-201ENST00000577987 79 ntBASIC1.97□□□□□ -2.09
LSM1O15116 MIR4529-201ENST00000578110 78 ntBASIC1.97□□□□□ -2.09
LSM1O15116 MIR4672-201ENST00000583126 81 ntBASIC1.97□□□□□ -2.09
LSM1O15116 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LSM1O15116 KC877982.1-201ENST00000602313 470 ntBASIC1.97□□□□□ -2.09
LSM1O15116 BNIP3P9-201ENST00000603714 553 ntBASIC1.97□□□□□ -2.09
LSM1O15116 AC013244.3-201ENST00000605614 388 ntBASIC1.97□□□□□ -2.09
LSM1O15116 AC106052.1-201ENST00000608029 497 ntBASIC1.97□□□□□ -2.09
LSM1O15116 AL391813.2-201ENST00000609113 322 ntBASIC1.97□□□□□ -2.09
LSM1O15116 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.97□□□□□ -2.09
LSM1O15116 Z99571.1-201ENST00000636677 394 ntBASIC1.97□□□□□ -2.09
LSM1O15116 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LSM1O15116 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
LSM1O15116 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.96□□□□□ -2.1
LSM1O15116 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.96□□□□□ -2.1
LSM1O15116 Y_RNA.46-201ENST00000362695 102 ntBASIC1.96□□□□□ -2.1
LSM1O15116 Y_RNA.111-201ENST00000363248 100 ntBASIC1.96□□□□□ -2.1
LSM1O15116 RNU6-931P-201ENST00000363850 107 ntBASIC1.96□□□□□ -2.1
LSM1O15116 RNU6-1280P-201ENST00000365211 107 ntBASIC1.96□□□□□ -2.1
LSM1O15116 RNU6-636P-201ENST00000384598 107 ntBASIC1.96□□□□□ -2.1
LSM1O15116 RAC1P6-201ENST00000423911 575 ntBASIC1.96□□□□□ -2.1
LSM1O15116 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.96□□□□□ -2.1
LSM1O15116 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.96□□□□□ -2.1
LSM1O15116 AL353706.1-201ENST00000436728 494 ntBASIC1.96□□□□□ -2.1
LSM1O15116 RPL7P12-201ENST00000446719 750 ntBASIC1.96□□□□□ -2.1
LSM1O15116 AL136380.1-201ENST00000447970 162 ntBASIC1.96□□□□□ -2.1
LSM1O15116 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.96□□□□□ -2.1
LSM1O15116 FCF1P6-201ENST00000456841 595 ntBASIC1.96□□□□□ -2.1
LSM1O15116 AC010486.1-201ENST00000511793 424 ntBASIC1.96□□□□□ -2.1
LSM1O15116 SNORA25.11-201ENST00000515935 105 ntBASIC1.96□□□□□ -2.1
LSM1O15116 SNORA48.11-201ENST00000517015 89 ntBASIC1.96□□□□□ -2.1
LSM1O15116 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.96□□□□□ -2.1
LSM1O15116 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.96□□□□□ -2.1
LSM1O15116 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.96□□□□□ -2.1
LSM1O15116 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.96□□□□□ -2.1
LSM1O15116 MIR4307-201ENST00000582802 84 ntBASIC1.96□□□□□ -2.1
LSM1O15116 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.96□□□□□ -2.1
LSM1O15116 AL670379.6-201ENST00000603753 252 ntBASIC1.96□□□□□ -2.1
LSM1O15116 AL670379.11-201ENST00000604059 253 ntBASIC1.96□□□□□ -2.1
LSM1O15116 AC008162.1-201ENST00000604718 254 ntBASIC1.96□□□□□ -2.1
LSM1O15116 AL670379.1-201ENST00000604752 252 ntBASIC1.96□□□□□ -2.1
LSM1O15116 AL670379.5-201ENST00000605253 252 ntBASIC1.96□□□□□ -2.1
LSM1O15116 AL670379.12-201ENST00000605291 253 ntBASIC1.96□□□□□ -2.1
LSM1O15116 AL670379.8-201ENST00000605353 252 ntBASIC1.96□□□□□ -2.1
LSM1O15116 AL670379.7-201ENST00000605823 252 ntBASIC1.96□□□□□ -2.1
LSM1O15116 AC108747.1-201ENST00000609508 535 ntBASIC1.96□□□□□ -2.1
LSM1O15116 AC010378.1-201ENST00000619270 362 ntBASIC1.96□□□□□ -2.1
LSM1O15116 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.96□□□□□ -2.1
LSM1O15116 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.96□□□□□ -2.1
LSM1O15116 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms