Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 DPPA3P3-201ENST00000603842 430 ntBASIC2.6□□□□□ -1.99
E2F3O00716 AC103591.3-201ENST00000608684 209 ntBASIC2.6□□□□□ -1.99
E2F3O00716 AC011939.3-201ENST00000613686 466 ntBASIC2.6□□□□□ -1.99
E2F3O00716 FRG1KP-201ENST00000623592 341 ntBASIC2.6□□□□□ -1.99
E2F3O00716 AC092656.1-203ENST00000624134 423 ntBASIC2.6□□□□□ -1.99
E2F3O00716 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.6□□□□□ -1.99
E2F3O00716 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
E2F3O00716 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.6□□□□□ -1.99
E2F3O00716 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
E2F3O00716 SNORA20.2-201ENST00000383922 131 ntBASIC2.59□□□□□ -1.99
E2F3O00716 RNU6-348P-201ENST00000384386 107 ntBASIC2.59□□□□□ -1.99
E2F3O00716 MIR34A-201ENST00000385130 110 ntBASIC2.59□□□□□ -1.99
E2F3O00716 DEFB108C-201ENST00000400154 252 ntBASIC2.59□□□□□ -1.99
E2F3O00716 RNU2-52P-201ENST00000410680 190 ntBASIC2.59□□□□□ -1.99
E2F3O00716 RNU6-248P-201ENST00000410720 107 ntBASIC2.59□□□□□ -1.99
E2F3O00716 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.59□□□□□ -1.99
E2F3O00716 NDUFS5P4-201ENST00000412983 318 ntBASIC2.59□□□□□ -1.99
E2F3O00716 AC096649.2-201ENST00000416186 393 ntBASIC2.59□□□□□ -1.99
E2F3O00716 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.59□□□□□ -1.99
E2F3O00716 ELOCP14-201ENST00000428070 331 ntBASIC2.59□□□□□ -1.99
E2F3O00716 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.59□□□□□ -1.99
E2F3O00716 AC104850.1-201ENST00000435940 476 ntBASIC2.59□□□□□ -1.99
E2F3O00716 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.59□□□□□ -1.99
E2F3O00716 ELOCP7-201ENST00000439968 331 ntBASIC2.59□□□□□ -1.99
E2F3O00716 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.59□□□□□ -1.99
E2F3O00716 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.59□□□□□ -1.99
E2F3O00716 Vault.3-201ENST00000516676 95 ntBASIC2.59□□□□□ -1.99
E2F3O00716 AC109329.2-201ENST00000519658 482 ntBASIC2.59□□□□□ -1.99
E2F3O00716 AP002963.1-201ENST00000530590 184 ntBASIC2.59□□□□□ -1.99
E2F3O00716 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.59□□□□□ -1.99
E2F3O00716 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.59□□□□□ -1.99
E2F3O00716 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.59□□□□□ -1.99
E2F3O00716 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.59□□□□□ -1.99
E2F3O00716 AC012213.3-201ENST00000577199 777 ntBASIC2.59□□□□□ -1.99
E2F3O00716 MIR3913-1-201ENST00000577744 102 ntBASIC2.59□□□□□ -1.99
E2F3O00716 AC103987.3-201ENST00000582071 292 ntBASIC2.59□□□□□ -1.99
E2F3O00716 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.59□□□□□ -1.99
E2F3O00716 AC064807.4-201ENST00000607201 407 ntBASIC2.59□□□□□ -1.99
E2F3O00716 AC098614.4-201ENST00000607601 462 ntBASIC2.59□□□□□ -1.99
E2F3O00716 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.59□□□□□ -1.99
E2F3O00716 AC072046.2-201ENST00000618366 268 ntBASIC2.59□□□□□ -1.99
E2F3O00716 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.59□□□□□ -2
E2F3O00716 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
E2F3O00716 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.58□□□□□ -2
E2F3O00716 AC110491.1-201ENST00000562191 2010 ntBASIC2.58□□□□□ -2
E2F3O00716 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
E2F3O00716 RNA5SP432-201ENST00000362480 116 ntBASIC2.58□□□□□ -2
E2F3O00716 RNU6-1284P-201ENST00000363701 100 ntBASIC2.58□□□□□ -2
E2F3O00716 Y_RNA.194-201ENST00000363985 102 ntBASIC2.58□□□□□ -2
E2F3O00716 XGY1-201ENST00000381172 446 ntBASIC2.58□□□□□ -2
E2F3O00716 RNU6-1042P-201ENST00000384204 107 ntBASIC2.58□□□□□ -2
E2F3O00716 RNU6-1072P-201ENST00000384703 107 ntBASIC2.58□□□□□ -2
E2F3O00716 RNU6-443P-201ENST00000384780 107 ntBASIC2.58□□□□□ -2
E2F3O00716 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.58□□□□□ -2
E2F3O00716 AL359634.1-202ENST00000404721 284 ntBASIC2.58□□□□□ -2
E2F3O00716 MIR1261-201ENST00000408659 82 ntBASIC2.58□□□□□ -2
E2F3O00716 AL663109.1-201ENST00000411498 844 ntBASIC2.58□□□□□ -2
E2F3O00716 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.58□□□□□ -2
E2F3O00716 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.58□□□□□ -2
E2F3O00716 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.58□□□□□ -2
E2F3O00716 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.58□□□□□ -2
E2F3O00716 HMGB1P9-201ENST00000429856 646 ntBASIC2.58□□□□□ -2
E2F3O00716 AC009961.2-201ENST00000435771 251 ntBASIC2.58□□□□□ -2
E2F3O00716 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.58□□□□□ -2
E2F3O00716 OSTCP8-201ENST00000445117 448 ntBASIC2.58□□□□□ -2
E2F3O00716 MTCO2P7-201ENST00000446518 666 ntBASIC2.58□□□□□ -2
E2F3O00716 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.58□□□□□ -2
E2F3O00716 AC011753.1-201ENST00000451001 220 ntBASIC2.58□□□□□ -2
E2F3O00716 CACYBPP2-201ENST00000453625 678 ntBASIC2.58□□□□□ -2
E2F3O00716 AP000705.1-201ENST00000454567 350 ntBASIC2.58□□□□□ -2
E2F3O00716 KLF3P2-201ENST00000465138 268 ntBASIC2.58□□□□□ -2
E2F3O00716 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
E2F3O00716 RAP1BP2-201ENST00000478270 544 ntBASIC2.58□□□□□ -2
E2F3O00716 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.58□□□□□ -2
E2F3O00716 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.58□□□□□ -2
E2F3O00716 RN7SKP298-201ENST00000515950 94 ntBASIC2.58□□□□□ -2
E2F3O00716 RNA5SP82-201ENST00000516707 92 ntBASIC2.58□□□□□ -2
E2F3O00716 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.58□□□□□ -2
E2F3O00716 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.58□□□□□ -2
E2F3O00716 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.58□□□□□ -2
E2F3O00716 NRBF2P1-201ENST00000587407 859 ntBASIC2.58□□□□□ -2
E2F3O00716 AC103710.2-201ENST00000609912 942 ntBASIC2.58□□□□□ -2
E2F3O00716 AC009509.4-201ENST00000619202 509 ntBASIC2.58□□□□□ -2
E2F3O00716 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.58□□□□□ -2
E2F3O00716 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
E2F3O00716 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.58□□□□□ -2
E2F3O00716 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.58□□□□□ -2
E2F3O00716 MTND5P29-201ENST00000458676 1807 ntBASIC2.58□□□□□ -2
E2F3O00716 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.58□□□□□ -2
E2F3O00716 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
E2F3O00716 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
E2F3O00716 SNORD56.2-201ENST00000363242 71 ntBASIC2.57□□□□□ -2
E2F3O00716 RNU4-1-201ENST00000363925 141 ntBASIC2.57□□□□□ -2
E2F3O00716 RNU4-24P-201ENST00000364565 139 ntBASIC2.57□□□□□ -2
E2F3O00716 RNU1-100P-201ENST00000365255 165 ntBASIC2.57□□□□□ -2
E2F3O00716 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
E2F3O00716 OR5H15-201ENST00000383696 930 ntBASIC2.57□□□□□ -2
E2F3O00716 RNU6-701P-201ENST00000384059 107 ntBASIC2.57□□□□□ -2
E2F3O00716 RNU6-1119P-201ENST00000384349 108 ntBASIC2.57□□□□□ -2
E2F3O00716 Y_RNA.559-201ENST00000384686 107 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms