Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 PRPS1P1-201ENST00000445305 876 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.61□□□□□ -1.83
FOXN3O00409 AC010099.1-201ENST00000455434 375 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 RPL23AP11-201ENST00000475260 469 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 AC022493.1-201ENST00000492984 337 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.61□□□□□ -1.83
FOXN3O00409 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXN3O00409 MTND3P25-201ENST00000509243 135 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 PHBP14-201ENST00000512887 367 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 SNORA31.1-201ENST00000515993 133 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 SNORA31.5-201ENST00000516190 133 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 RNU1-103P-201ENST00000516502 125 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 RNU6-572P-201ENST00000516724 80 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 RNU6-1153P-201ENST00000516760 105 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXN3O00409 AL118558.2-201ENST00000556294 238 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.61□□□□□ -1.83
FOXN3O00409 MIR4429-201ENST00000580105 73 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXN3O00409 AC006557.5-201ENST00000603126 811 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 ATP1B3P1-201ENST00000605365 821 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 AC007742.2-201ENST00000618226 398 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 AC006504.8-201ENST00000621046 635 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 AP003122.6-201ENST00000623831 495 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
FOXN3O00409 SRP72P2-201ENST00000344851 1979 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
FOXN3O00409 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXN3O00409 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXN3O00409 RNU4-73P-201ENST00000363164 141 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 RNU6-1303P-201ENST00000364841 107 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 RNU6-434P-201ENST00000384376 107 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 MIR218-2-201ENST00000385006 110 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 SNORA16.2-201ENST00000390991 127 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXN3O00409 RNU6-373P-201ENST00000411247 98 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXN3O00409 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXN3O00409 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.6□□□□□ -1.83
FOXN3O00409 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXN3O00409 ERLEC1P1-201ENST00000433806 578 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.6□□□□□ -1.83
FOXN3O00409 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 AL360271.2-201ENST00000447710 161 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.6□□□□□ -1.83
FOXN3O00409 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXN3O00409 AL583843.1-201ENST00000456070 346 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 RPL26P9-201ENST00000457466 433 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 AC091179.1-201ENST00000461606 579 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.6□□□□□ -1.83
FOXN3O00409 AC091885.1-201ENST00000506658 268 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 Y_RNA.675-201ENST00000516389 149 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXN3O00409 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXN3O00409 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXN3O00409 AC005476.1-201ENST00000554427 397 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 HMGB1P14-201ENST00000557424 591 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 MIR4424-201ENST00000585257 86 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 AC073539.2-201ENST00000597113 165 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 AC092747.3-201ENST00000603769 301 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 AC245389.1-201ENST00000605141 529 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 U2.17-201ENST00000611454 95 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXN3O00409 AL359693.1-201ENST00000614959 2407 ntBASIC3.6□□□□□ -1.83
FOXN3O00409 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.6□□□□□ -1.83
FOXN3O00409 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.6□□□□□ -1.83
FOXN3O00409 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXN3O00409 AL161912.2-201ENST00000565707 3007 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 RNU6-371P-201ENST00000364283 108 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 SNORA75B-201ENST00000384053 137 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 AL356057.2-201ENST00000403318 432 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 RNA5SP31-201ENST00000411144 127 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.59□□□□□ -1.83
FOXN3O00409 BX682237.1-201ENST00000415016 335 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 AC093578.1-201ENST00000415219 368 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.59□□□□□ -1.83
FOXN3O00409 AL353729.1-201ENST00000425044 720 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 SRIP2-201ENST00000428470 166 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 AL669831.1-202ENST00000428504 417 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 GTF2IP13-201ENST00000438487 386 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.59□□□□□ -1.83
FOXN3O00409 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.59□□□□□ -1.83
FOXN3O00409 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.59□□□□□ -1.83
FOXN3O00409 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.59□□□□□ -1.83
FOXN3O00409 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.59□□□□□ -1.83
FOXN3O00409 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.59□□□□□ -1.83
FOXN3O00409 FCF1P8-201ENST00000510322 597 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 AC009902.1-201ENST00000519351 183 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 AC007458.1-201ENST00000542812 373 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 AC078814.3-201ENST00000553036 491 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 ANP32BP3-201ENST00000559213 706 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 AC011712.1-201ENST00000588959 234 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 RNU6-89P-201ENST00000606519 100 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 AC034229.5-201ENST00000624258 185 ntBASIC3.59□□□□□ -1.83
FOXN3O00409 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
FOXN3O00409 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
FOXN3O00409 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
FOXN3O00409 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
FOXN3O00409 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
FOXN3O00409 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms