Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.74□□□□□ -2.13
SMKR1H3BMG3 MRPS36P3-201ENST00000519284 130 ntBASIC1.74□□□□□ -2.13
SMKR1H3BMG3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.74□□□□□ -2.13
SMKR1H3BMG3 MIR4529-201ENST00000578110 78 ntBASIC1.74□□□□□ -2.13
SMKR1H3BMG3 AC078899.2-201ENST00000595282 212 ntBASIC1.74□□□□□ -2.13
SMKR1H3BMG3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.74□□□□□ -2.13
SMKR1H3BMG3 AC105129.3-201ENST00000605455 485 ntBASIC1.74□□□□□ -2.13
SMKR1H3BMG3 AL031775.1-201ENST00000607014 887 ntBASIC1.74□□□□□ -2.13
SMKR1H3BMG3 AL031601.2-202ENST00000622650 282 ntBASIC1.74□□□□□ -2.13
SMKR1H3BMG3 AL356266.1-201ENST00000623311 483 ntBASIC1.74□□□□□ -2.13
SMKR1H3BMG3 MIR3529-201ENST00000637713 78 ntBASIC1.74□□□□□ -2.13
SMKR1H3BMG3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
SMKR1H3BMG3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
SMKR1H3BMG3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
SMKR1H3BMG3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 RNU5F-6P-201ENST00000362979 116 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 RNU6-1214P-201ENST00000363650 109 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 RNU4-1-201ENST00000363925 141 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 SNORA25B-201ENST00000365507 128 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 RNU6-843P-201ENST00000384454 104 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 RNU1-57P-201ENST00000384491 166 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 MIR17-201ENST00000385012 84 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AL139039.1-201ENST00000401900 692 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 U3.40-201ENST00000408706 208 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 Y_RNA.608-201ENST00000410647 95 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AL356379.1-201ENST00000414105 126 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC138623.1-201ENST00000418060 216 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC119618.1-201ENST00000434191 222 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 GPM6BP3-201ENST00000442797 145 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 NDUFB1P2-201ENST00000449477 176 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 RPL23AP45-201ENST00000476406 468 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC068587.2-201ENST00000478386 781 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 LINC00888-204ENST00000487386 421 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 MTAPP1-201ENST00000489154 819 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AP000889.2-201ENST00000532684 490 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC135279.1-201ENST00000543493 504 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC009097.3-201ENST00000563557 1018 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC002400.1-201ENST00000569310 726 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 RPL30P11-203ENST00000598995 310 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC011458.1-201ENST00000604034 617 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 NDUFA8P1-201ENST00000605525 367 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC126118.1-201ENST00000607744 628 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC092140.2-201ENST00000618027 521 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AL162373.1-201ENST00000620433 407 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 AC068787.1-201ENST00000623908 691 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 RBBP8P1-201ENST00000449447 1844 ntBASIC1.73□□□□□ -2.13
SMKR1H3BMG3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SMKR1H3BMG3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SMKR1H3BMG3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SMKR1H3BMG3 RNU6-1010P-201ENST00000362757 107 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 RNA5SP72-201ENST00000364442 117 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 SNORD114-30-201ENST00000364448 72 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 MIR449B-201ENST00000384995 97 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 MRPL42P2-201ENST00000403169 426 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AL627311.1-201ENST00000431514 115 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AC012308.1-201ENST00000451232 178 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AP000797.1-201ENST00000478870 387 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AC010587.1-201ENST00000505809 469 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 SNORA4.4-201ENST00000515921 135 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AC109329.1-201ENST00000518744 317 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AC107953.1-201ENST00000522216 297 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AP003181.2-201ENST00000528941 181 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.72□□□□□ -2.13
SMKR1H3BMG3 CR383656.8-201ENST00000549046 145 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AC233702.2-202ENST00000562547 291 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 MIR5697-201ENST00000578045 78 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 MIR3158-1-201ENST00000583596 81 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.72□□□□□ -2.13
SMKR1H3BMG3 BNIP3P33-201ENST00000598912 569 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AC073410.2-201ENST00000603240 332 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AL158032.1-201ENST00000605401 106 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AC022202.1-201ENST00000613515 211 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 CKAP2P1-201ENST00000555477 2049 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SMKR1H3BMG3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SMKR1H3BMG3 AC103710.2-202ENST00000641454 2853 ntBASIC1.72□□□□□ -2.13
SMKR1H3BMG3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SMKR1H3BMG3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SMKR1H3BMG3 RNU6-1159P-201ENST00000362933 107 ntBASIC1.71□□□□□ -2.14
SMKR1H3BMG3 RNU6-942P-201ENST00000363002 107 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms