Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 RNU6-486P-201ENST00000363116 107 ntBASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 MIR506-201ENST00000384998 124 ntBASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 HMGB1P17-201ENST00000403495 628 ntBASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 RNA5SP501-201ENST00000410990 112 ntBASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 MED14P1-201ENST00000430517 648 ntBASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 AC092628.1-201ENST00000436250 252 ntBASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 SNRPEP7-201ENST00000438350 220 ntBASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 AC112492.4-201ENST00000456549 352 ntBASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 RPS26P55-201ENST00000471178 356 ntBASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 COPS8P3-201ENST00000526024 482 ntBASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 MIR4452-201ENST00000583004 71 ntBASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 MIR4765-201ENST00000585007 77 ntBASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 AC068722.2-201ENST00000618734 544 ntBASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 MIR6788-201ENST00000618842 66 ntBASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 RBBP8P1-201ENST00000449447 1844 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 RNU1-124P-201ENST00000363861 145 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 SNORA4.1-201ENST00000364263 144 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 SNORA29-201ENST00000384183 140 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 MIR95-201ENST00000385072 81 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 CST2P1-201ENST00000425770 87 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 FABP5P14-201ENST00000437273 393 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 RPL26P6-201ENST00000440913 438 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 FCF1P6-201ENST00000456841 595 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 AC092757.1-201ENST00000467293 467 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 RNU6-27P-201ENST00000516146 107 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 SCARNA16.2-201ENST00000516520 172 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 NDUFA5P6-201ENST00000542110 379 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 AC007151.1-201ENST00000572774 483 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 U1.36-201ENST00000620684 176 ntBASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.37□□□□□ -2.35
CPSF4LA6NMK7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 Y_RNA.4-201ENST00000362333 112 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 AL355615.1-201ENST00000406187 641 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 UBE2V1P9-201ENST00000414760 368 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 AC097463.2-201ENST00000421074 142 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 AL160275.3-201ENST00000423876 471 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 ZNF863P-201ENST00000426746 417 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 RAB11AP1-201ENST00000442978 646 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 AL353691.1-201ENST00000451332 387 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 RPL31P3-201ENST00000458430 332 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 AC114982.1-201ENST00000469402 321 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 AC145146.1-201ENST00000496370 254 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 SNORD116-28-201ENST00000516123 91 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 C1DP5-201ENST00000525775 383 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 RAB11AP2-201ENST00000545905 639 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 MIR4661-201ENST00000582720 75 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 AL512605.2-201ENST00000592972 256 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 AL078604.3-201ENST00000615580 211 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 AC007490.1-201ENST00000624321 703 ntBASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
CPSF4LA6NMK7 MTND4P16-201ENST00000466108 1367 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 OR5T3-201ENST00000303059 1023 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 OR4G2P-201ENST00000328113 903 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 Y_RNA.164-201ENST00000363709 102 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 RNA5SP240-201ENST00000365355 128 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 AL139397.2-201ENST00000404529 772 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 RNA5SP100-201ENST00000410903 110 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 RNA5SP59-201ENST00000410922 110 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 RNU2-64P-201ENST00000411315 191 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 AL590383.1-201ENST00000428602 75 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 MTCO2P20-201ENST00000437339 673 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 TAF9P1-201ENST00000445421 515 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 AC244505.3-201ENST00000454598 187 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 TAF9P2-201ENST00000454958 515 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 RPL26P9-201ENST00000457466 433 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 AC025459.1-201ENST00000504072 156 ntBASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.35□□□□□ -2.35
CPSF4LA6NMK7 AC113398.2-201ENST00000507630 558 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms