Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 Y_RNA.409-201ENST00000383990 98 ntBASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 RNU6-1215P-201ENST00000384441 102 ntBASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 RNU2-36P-201ENST00000410361 191 ntBASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 NUP35P1-201ENST00000422734 947 ntBASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 RPS15AP7-201ENST00000439294 405 ntBASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 DNAJC19P4-201ENST00000440115 345 ntBASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 MTCO3P45-201ENST00000443036 613 ntBASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 RPL23AP45-201ENST00000476406 468 ntBASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 RPS15AP36-201ENST00000492022 382 ntBASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 RNU6-390P-201ENST00000516259 103 ntBASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 SNORA31.18-201ENST00000517043 134 ntBASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 AC068790.3-201ENST00000602988 553 ntBASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 AC136601.2-201ENST00000604356 474 ntBASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 AC103710.2-201ENST00000609912 942 ntBASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 AC245517.5-201ENST00000611529 162 ntBASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 AL157786.1-207ENST00000627771 695 ntBASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.68□□□□□ -1.98
TRIM49BA6NDI0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 MIR449A-201ENST00000362113 91 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 SNORA68.1-201ENST00000364537 132 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 RNU6-259P-201ENST00000383999 107 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 Y_RNA.554-201ENST00000384672 102 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 RNU6-192P-201ENST00000391253 100 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 RNA5SP184-201ENST00000411071 108 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 MTND1P4-201ENST00000435196 415 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 RPL23AP20-201ENST00000447965 421 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 RPS3P1-201ENST00000456781 192 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 RPL36AP51-201ENST00000487216 318 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 RN7SKP298-201ENST00000515950 94 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 OR1M4P-201ENST00000589199 287 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 DPPA3P3-201ENST00000603842 430 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 RNU6-87P-201ENST00000607561 108 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 AC092954.2-201ENST00000609103 430 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 AC026585.1-201ENST00000619582 524 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 AC068792.1-201ENST00000621354 417 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 OR5AK4P-201ENST00000635912 903 ntBASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.67□□□□□ -1.98
TRIM49BA6NDI0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 RNU5A-8P-201ENST00000364102 114 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 RNU6-188P-201ENST00000364207 107 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 Y_RNA.372-201ENST00000365599 102 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 RNU6-517P-201ENST00000384362 110 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 MIR196B-201ENST00000384852 84 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AL356057.2-201ENST00000403318 432 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AC127391.1-201ENST00000411737 98 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 USP12PX-201ENST00000432383 1057 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 snoU109.1-201ENST00000459339 135 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AC008481.1-201ENST00000463278 396 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 RPL9P6-201ENST00000492764 598 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AC091133.4-201ENST00000511142 308 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 SCARNA24.1-201ENST00000516465 137 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 RNA5SP290-201ENST00000517133 127 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AC027176.1-201ENST00000560204 514 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 EIF1P4-201ENST00000572664 335 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AL391646.1-201ENST00000603860 190 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 MTND4LP5-201ENST00000605152 292 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 MIR98-201ENST00000606724 119 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AL133173.2-201ENST00000614270 90 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AC034102.8-201ENST00000615146 484 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 AC138649.3-201ENST00000622154 254 ntBASIC2.66□□□□□ -1.98
TRIM49BA6NDI0 PISRT1-201ENST00000626175 531 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms