Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AC006484.1-201ENST00000435086 1884 ntBASIC5.15□□□□□ -1.58
USP17L3A6NCW0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
USP17L3A6NCW0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
USP17L3A6NCW0 RNU6-78P-201ENST00000362897 107 ntBASIC5.15□□□□□ -1.59
USP17L3A6NCW0 Y_RNA.84-201ENST00000363011 104 ntBASIC5.15□□□□□ -1.59
USP17L3A6NCW0 SNORA7.2-201ENST00000364446 145 ntBASIC5.15□□□□□ -1.59
USP17L3A6NCW0 Y_RNA.439-201ENST00000384119 94 ntBASIC5.15□□□□□ -1.59
USP17L3A6NCW0 SNORD96B-201ENST00000386148 79 ntBASIC5.15□□□□□ -1.59
USP17L3A6NCW0 BTF3L4P2-201ENST00000392798 346 ntBASIC5.15□□□□□ -1.59
USP17L3A6NCW0 RN7SKP167-201ENST00000411047 285 ntBASIC5.15□□□□□ -1.59
USP17L3A6NCW0 RNU4-61P-201ENST00000411243 107 ntBASIC5.15□□□□□ -1.59
USP17L3A6NCW0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.15□□□□□ -1.59
USP17L3A6NCW0 AC091286.1-201ENST00000431233 461 ntBASIC5.15□□□□□ -1.59
USP17L3A6NCW0 AL591043.1-201ENST00000432461 424 ntBASIC5.15□□□□□ -1.59
USP17L3A6NCW0 SNRPEP9-201ENST00000436794 238 ntBASIC5.15□□□□□ -1.59
USP17L3A6NCW0 AC004383.1-201ENST00000438135 289 ntBASIC5.15□□□□□ -1.59
USP17L3A6NCW0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.15□□□□□ -1.59
USP17L3A6NCW0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.15□□□□□ -1.59
USP17L3A6NCW0 RNA5SP143-201ENST00000516936 115 ntBASIC5.15□□□□□ -1.59
USP17L3A6NCW0 IFITM8P-201ENST00000522529 394 ntBASIC5.15□□□□□ -1.59
USP17L3A6NCW0 AC007458.1-201ENST00000542812 373 ntBASIC5.15□□□□□ -1.59
USP17L3A6NCW0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.15□□□□□ -1.59
USP17L3A6NCW0 AC090617.7-201ENST00000623952 126 ntBASIC5.15□□□□□ -1.59
USP17L3A6NCW0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
USP17L3A6NCW0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
USP17L3A6NCW0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.15□□□□□ -1.59
USP17L3A6NCW0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
USP17L3A6NCW0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
USP17L3A6NCW0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.15□□□□□ -1.59
USP17L3A6NCW0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.15□□□□□ -1.59
USP17L3A6NCW0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 LINC01109-201ENST00000603837 3081 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 MIR335-201ENST00000362173 94 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 SNORD27-201ENST00000363981 72 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 RNU6-72P-201ENST00000384285 79 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 RNY3P4-201ENST00000384428 101 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 PTMAP2-201ENST00000397627 327 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 AL590135.1-201ENST00000422215 156 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 AC007389.2-201ENST00000434630 306 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 RNA5SP246-201ENST00000458909 119 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 snoU109.2-201ENST00000459316 135 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 RNU6-138P-201ENST00000515952 107 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 SNORA31.18-201ENST00000517043 134 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 RNU6-1073P-201ENST00000517182 106 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 RN7SKP40-201ENST00000517211 242 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 CASP1P1-201ENST00000526345 212 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 MIR4782-201ENST00000577987 79 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 AC010201.1-201ENST00000605051 540 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 AP001282.2-201ENST00000616149 309 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 MIR376A1-201ENST00000616574 68 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 U6.99-201ENST00000637524 83 ntBASIC5.14□□□□□ -1.59
USP17L3A6NCW0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.14□□□□□ -1.59
USP17L3A6NCW0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP17L3A6NCW0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.13□□□□□ -1.59
USP17L3A6NCW0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP17L3A6NCW0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
USP17L3A6NCW0 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.13□□□□□ -1.59
USP17L3A6NCW0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
USP17L3A6NCW0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP17L3A6NCW0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
USP17L3A6NCW0 RNU2-71P-201ENST00000411395 189 ntBASIC5.13□□□□□ -1.59
USP17L3A6NCW0 RPS6P12-201ENST00000432491 726 ntBASIC5.13□□□□□ -1.59
USP17L3A6NCW0 HMGN2P21-201ENST00000447764 270 ntBASIC5.13□□□□□ -1.59
USP17L3A6NCW0 AL358232.1-201ENST00000448030 501 ntBASIC5.13□□□□□ -1.59
USP17L3A6NCW0 AC006026.2-201ENST00000457376 180 ntBASIC5.13□□□□□ -1.59
USP17L3A6NCW0 snoU13.22-201ENST00000459428 104 ntBASIC5.13□□□□□ -1.59
USP17L3A6NCW0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.13□□□□□ -1.59
USP17L3A6NCW0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.13□□□□□ -1.59
USP17L3A6NCW0 AC010265.1-201ENST00000513509 211 ntBASIC5.13□□□□□ -1.59
USP17L3A6NCW0 Y_RNA.700-201ENST00000516806 100 ntBASIC5.13□□□□□ -1.59
USP17L3A6NCW0 SYF2P1-201ENST00000550658 413 ntBASIC5.13□□□□□ -1.59
USP17L3A6NCW0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.13□□□□□ -1.59
USP17L3A6NCW0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.13□□□□□ -1.59
USP17L3A6NCW0 AC136601.2-201ENST00000604356 474 ntBASIC5.13□□□□□ -1.59
USP17L3A6NCW0 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.13□□□□□ -1.59
USP17L3A6NCW0 U6.92-201ENST00000636464 89 ntBASIC5.13□□□□□ -1.59
USP17L3A6NCW0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
USP17L3A6NCW0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms