Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AL158827.2-201ENST00000602494 330 ntBASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 AC133794.1-201ENST00000602731 914 ntBASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 ELOCP5-201ENST00000604924 333 ntBASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 AL691447.3-201ENST00000635020 330 ntBASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 SNORD115-3-201ENST00000363100 82 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 SNORA70.7-201ENST00000384159 133 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 MIR597-201ENST00000384968 97 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 CCNG1P1-201ENST00000406783 885 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 MIR1262-201ENST00000408276 93 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 UBE2V1P11-201ENST00000411559 285 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 AC092634.6-201ENST00000418558 192 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 AL451054.2-201ENST00000420896 202 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 C1DP1-201ENST00000426049 402 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 TOMM20P4-201ENST00000427861 435 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 ZNF965P-201ENST00000432501 817 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 RPL36AP48-201ENST00000485521 314 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 BOLA3P3-201ENST00000505182 232 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 AC079598.5-201ENST00000547460 117 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 AC125611.1-201ENST00000549563 229 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 AC012213.3-201ENST00000577199 777 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 BNIP3P24-201ENST00000593398 557 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 AC069304.2-201ENST00000605154 435 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 AL355802.4-201ENST00000607635 548 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 AP005229.2-201ENST00000609980 697 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 MIR6078-201ENST00000611069 100 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 MIR8074-201ENST00000615081 81 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 AC090517.3-201ENST00000625170 141 ntBASIC0.75□□□□□ -2.29
TCRBV3S1A0A5B6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 RBBP8P1-201ENST00000449447 1844 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 RNU6-271P-201ENST00000363858 105 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 RNU11-3P-201ENST00000391111 133 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 RNA5SP100-201ENST00000410903 110 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 RNA5SP59-201ENST00000410922 110 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 RPL26P27-201ENST00000414397 437 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 AL135790.2-201ENST00000437701 267 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 snoU13.9-201ENST00000458927 103 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 AL121594.1-201ENST00000475906 575 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 AL133373.1-201ENST00000497098 94 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 MTCO3P42-201ENST00000509488 518 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 MTCO3P39-201ENST00000514812 518 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 AP003122.4-201ENST00000530980 758 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 AC090115.3-201ENST00000553218 849 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 AP005136.1-201ENST00000579765 429 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 NIFKP6-201ENST00000598115 845 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 AL357094.1-201ENST00000603845 844 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 AC079416.3-201ENST00000624479 549 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 AL136313.1-201ENST00000624804 202 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 U6.101-201ENST00000637707 76 ntBASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.74□□□□□ -2.29
TCRBV3S1A0A5B6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 RNU6-796P-201ENST00000391086 107 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AC007435.1-201ENST00000421086 415 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 PTGES3P4-201ENST00000426243 356 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 ELOCP14-201ENST00000428070 331 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 ELOCP7-201ENST00000439968 331 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AC002381.1-201ENST00000447049 280 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AL513124.1-201ENST00000450410 614 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 CECR9-201ENST00000453421 199 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AC112492.4-201ENST00000456549 352 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 snoU13.26-201ENST00000459452 105 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AC011005.2-201ENST00000487324 359 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AL160314.1-201ENST00000490836 438 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 RNU6-667P-201ENST00000517186 102 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AC087441.2-201ENST00000529141 262 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AL121821.2-201ENST00000556081 394 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 BNIP3P27-201ENST00000599991 412 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AC004492.1-201ENST00000607036 742 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AP001033.2-201ENST00000609701 1003 ntBASIC0.73□□□□□ -2.29
TCRBV3S1A0A5B6 AC013412.1-201ENST00000610687 192 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms