Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 MTCO3P13-201ENST00000577757 781 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 MIR5690-201ENST00000583739 73 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 FAM157A-202ENST00000615155 405 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AC106871.1-201ENST00000568324 3102 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 RN7SKP44-201ENST00000363602 316 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 SNORD42.2-201ENST00000365570 69 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 Y_RNA.480-201ENST00000384364 102 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 MIR559-201ENST00000385188 96 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 MIR1290-201ENST00000408735 78 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AC017083.1-201ENST00000428093 483 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AC005300.1-201ENST00000428401 373 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AL356867.1-201ENST00000429623 299 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AL353705.1-201ENST00000433468 480 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 TXNP1-201ENST00000441872 371 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AC115115.1-201ENST00000449927 248 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 RPL23AP14-201ENST00000468281 468 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AC009901.1-201ENST00000506703 541 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AC005741.1-201ENST00000511094 432 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 SNORA31.8-201ENST00000516327 108 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 SNORA64.4-201ENST00000516632 81 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AF186190.1-201ENST00000517470 480 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AC087854.1-201ENST00000519706 414 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 RNU6-323P-201ENST00000521915 107 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 APOOP3-201ENST00000536787 586 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AC020661.2-201ENST00000560114 134 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 CYP2C61P-201ENST00000604072 290 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AC080078.3-201ENST00000605407 463 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AL627309.6-201ENST00000606857 840 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AP002826.1-201ENST00000608835 315 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AC107294.1-201ENST00000609524 467 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 MIR7975-201ENST00000619350 68 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 SRP72P2-201ENST00000344851 1979 ntBASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.39□□□□□ -1.87
TCRBV5S1A1TA0A578 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 Y_RNA.187-201ENST00000363918 113 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 SNORA4.3-201ENST00000365564 137 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 AL357075.1-201ENST00000404107 726 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 SKA2P1-201ENST00000425592 390 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 USP9YP7-201ENST00000436723 430 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 USP9YP32-201ENST00000452432 430 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 Y_RNA.639-201ENST00000458981 102 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 RNU7-152P-201ENST00000458982 64 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 AC117503.1-201ENST00000472241 394 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 SCARNA15.2-201ENST00000516409 127 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 Vault.1-201ENST00000516474 102 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 RNU6-1332P-201ENST00000516666 104 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 HIGD1AP1-201ENST00000550979 275 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 AL163153.1-201ENST00000554223 283 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 AL162713.1-201ENST00000604480 262 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 AL157817.1-201ENST00000614264 790 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 AL391261.4-201ENST00000616012 481 ntBASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
TCRBV5S1A1TA0A578 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TCRBV5S1A1TA0A578 MIR369-201ENST00000362155 70 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms