Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.59□□□□□ -2
TRBV4-1A0A0J9YWV2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.59□□□□□ -2
TRBV4-1A0A0J9YWV2 CKAP2P1-201ENST00000555477 2049 ntBASIC2.59□□□□□ -2
TRBV4-1A0A0J9YWV2 MTND4P35-201ENST00000604257 1375 ntBASIC2.59□□□□□ -2
TRBV4-1A0A0J9YWV2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 Y_RNA.6-201ENST00000362350 114 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 RNU6-996P-201ENST00000365438 107 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 Y_RNA.381-201ENST00000365666 102 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 RNU6-780P-201ENST00000391030 104 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 RNU6-903P-201ENST00000391270 109 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AL591416.1-201ENST00000404015 867 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AC098614.2-201ENST00000426040 255 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 RPL7P54-201ENST00000438336 674 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 NIPA2P5-201ENST00000452282 464 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 SNORA84-201ENST00000459229 133 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AL163973.1-201ENST00000484753 577 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AC022493.1-201ENST00000492984 337 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 SNORA9.3-201ENST00000516383 129 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 RNU6-314P-201ENST00000516574 104 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AC025755.1-201ENST00000521306 278 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 HPRT1P3-201ENST00000539521 576 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 MIR3605-201ENST00000583214 100 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AC119501.1-201ENST00000603646 475 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AL138889.2-201ENST00000603883 242 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AC007621.1-201ENST00000604544 437 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 MTND4LP5-201ENST00000605152 292 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AC004852.3-201ENST00000614131 326 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 U4.5-201ENST00000617137 123 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AC034229.5-201ENST00000624258 185 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AC008669.1-201ENST00000565823 2178 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 AC110491.1-201ENST00000562191 2010 ntBASIC2.58□□□□□ -2
TRBV4-1A0A0J9YWV2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 RNU6-552P-201ENST00000362869 119 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 Y_RNA.255-201ENST00000364581 97 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 RNU6-116P-201ENST00000384042 109 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 RNU6-517P-201ENST00000384362 110 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 RNVU1-14-201ENST00000384770 164 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 MIR578-201ENST00000384828 96 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 RNA5SP111-201ENST00000411386 101 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 RPL7P10-201ENST00000417407 739 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 ATG3P1-201ENST00000419507 911 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 MTCYBP8-201ENST00000422855 651 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AL353729.1-201ENST00000425044 720 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AL513043.1-201ENST00000439124 535 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AC098831.1-201ENST00000440661 216 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AL360271.2-201ENST00000447710 161 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 RNU6-261P-201ENST00000459506 102 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AC091826.1-201ENST00000514065 313 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 RNU6-835P-201ENST00000516974 104 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AP003033.1-201ENST00000527244 415 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AK6P1-201ENST00000540219 478 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 ELOCP31-201ENST00000540463 467 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AL512360.1-201ENST00000555346 234 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 MIR548AC-201ENST00000585049 88 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 DEFB131E-202ENST00000602581 683 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AC024220.1-201ENST00000603675 484 ntBASIC2.57□□□□□ -2
TRBV4-1A0A0J9YWV2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms