Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 RNU2-48P-201ENST00000410694 191 ntBASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 AC078974.1-201ENST00000411597 223 ntBASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 TRIM60P13-201ENST00000432350 1283 ntBASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 SNRPEP9-201ENST00000436794 238 ntBASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 PTGES3P1-201ENST00000439531 483 ntBASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 MOB1AP2-201ENST00000446060 614 ntBASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 USP9YP34-201ENST00000453983 808 ntBASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 snoU13.9-201ENST00000458927 103 ntBASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 AL121594.1-201ENST00000475906 575 ntBASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 AL133373.1-201ENST00000497098 94 ntBASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 RNU6-528P-201ENST00000516926 100 ntBASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 LARP7P2-201ENST00000575306 125 ntBASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 MIR3973-201ENST00000579824 107 ntBASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 AP005229.2-201ENST00000609980 697 ntBASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 AC091895.1-201ENST00000624494 256 ntBASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.6□□□□□ -2.31
TRAV1-2A0A0B4J238 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 RNU6-53P-201ENST00000365367 106 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 SNORA70.7-201ENST00000384159 133 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 MIR597-201ENST00000384968 97 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 MIR1262-201ENST00000408276 93 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 CR848007.2-201ENST00000424918 787 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 AL121890.1-201ENST00000435457 205 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 NDUFA5P7-201ENST00000452914 242 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 RPL30P7-201ENST00000479312 323 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 RPL36AP48-201ENST00000485521 314 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 SNORA25.11-201ENST00000515935 105 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 AP003122.4-201ENST00000530980 758 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 AC079598.5-201ENST00000547460 117 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 MIR3167-201ENST00000579623 85 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 VN1R107P-201ENST00000601784 209 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 NDUFA8P1-201ENST00000605525 367 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 AL603758.1-201ENST00000618654 241 ntBASIC0.59□□□□□ -2.31
TRAV1-2A0A0B4J238 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.59□□□□□ -2.32
TRAV1-2A0A0B4J238 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.59□□□□□ -2.32
TRAV1-2A0A0B4J238 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.59□□□□□ -2.32
TRAV1-2A0A0B4J238 AC068700.1-201ENST00000565862 3754 ntBASIC0.59□□□□□ -2.32
TRAV1-2A0A0B4J238 AC008163.1-202ENST00000636004 2889 ntBASIC0.59□□□□□ -2.32
TRAV1-2A0A0B4J238 AL391516.1-201ENST00000554380 2449 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 MIR302D-201ENST00000362275 68 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 SNORD115-3-201ENST00000363100 82 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 RNU5E-8P-201ENST00000363502 116 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 SNORA25.8-201ENST00000364831 128 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 MIR525-201ENST00000384978 85 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 CCNG1P1-201ENST00000406783 885 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 AC127391.1-201ENST00000411737 98 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 RPL37P10-201ENST00000412884 288 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 AC004941.2-201ENST00000427009 228 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 MTCO2P20-201ENST00000437339 673 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 MTCO1P44-201ENST00000441935 243 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 AL929288.2-201ENST00000446368 407 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 RPS26P55-201ENST00000471178 356 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 YWHAEP4-201ENST00000505390 198 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 SNORA48.9-201ENST00000516419 162 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 AC095057.3-201ENST00000567102 1157 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 AC012414.6-201ENST00000568241 401 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 AC012213.3-201ENST00000577199 777 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 SNORA77B-201ENST00000578179 125 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 BNIP3P27-201ENST00000599991 412 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 AC069304.2-201ENST00000605154 435 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 AC239868.4-201ENST00000608318 671 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 AC108706.1-201ENST00000611053 297 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 AC073569.3-201ENST00000619055 682 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 RBBP8P1-201ENST00000449447 1844 ntBASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.58□□□□□ -2.32
TRAV1-2A0A0B4J238 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.57□□□□□ -2.32
TRAV1-2A0A0B4J238 MIR378A-201ENST00000362177 66 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms