Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 CYCSP27-201ENST00000527643 293 ntBASIC0.84□□□□□ -2.27
TRAV2A0A0B4J234 RPL21P5-201ENST00000554662 472 ntBASIC0.84□□□□□ -2.27
TRAV2A0A0B4J234 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.84□□□□□ -2.27
TRAV2A0A0B4J234 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.84□□□□□ -2.27
TRAV2A0A0B4J234 MIR4498-201ENST00000577599 66 ntBASIC0.84□□□□□ -2.27
TRAV2A0A0B4J234 MIR4295-201ENST00000585286 85 ntBASIC0.84□□□□□ -2.27
TRAV2A0A0B4J234 AL713866.2-201ENST00000603579 219 ntBASIC0.84□□□□□ -2.27
TRAV2A0A0B4J234 NDUFA8P1-201ENST00000605525 367 ntBASIC0.84□□□□□ -2.27
TRAV2A0A0B4J234 AC092953.2-201ENST00000608000 699 ntBASIC0.84□□□□□ -2.27
TRAV2A0A0B4J234 AC013476.2-201ENST00000614456 459 ntBASIC0.84□□□□□ -2.27
TRAV2A0A0B4J234 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.84□□□□□ -2.27
TRAV2A0A0B4J234 AC080188.3-201ENST00000624842 748 ntBASIC0.84□□□□□ -2.27
TRAV2A0A0B4J234 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.84□□□□□ -2.27
TRAV2A0A0B4J234 U2.21-201ENST00000637295 81 ntBASIC0.84□□□□□ -2.27
TRAV2A0A0B4J234 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
TRAV2A0A0B4J234 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.84□□□□□ -2.28
TRAV2A0A0B4J234 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 RNU6-392P-201ENST00000364926 101 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 MIR95-201ENST00000385072 81 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 RNA5SP465-201ENST00000391195 109 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 AL133475.1-201ENST00000404414 305 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 MRPL35P3-201ENST00000421557 364 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 NANOGP2-201ENST00000435391 727 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 AL135790.2-201ENST00000437701 267 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 AC079448.1-201ENST00000449377 373 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 KATNBL1P6-201ENST00000453433 915 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 MTND3P4-201ENST00000453537 303 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 SNORD97-201ENST00000459187 142 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 AC099513.1-201ENST00000490423 301 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 AL160314.1-201ENST00000490836 438 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 AC139453.3-201ENST00000493276 369 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 RNU6-581P-201ENST00000516214 105 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 NDUFA5P6-201ENST00000542110 379 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 AC098848.2-201ENST00000588023 330 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 AL359821.1-201ENST00000605519 182 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 AL355802.4-201ENST00000607635 548 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 AF129408.1-201ENST00000608767 431 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 ZNF849P-201ENST00000594711 1566 ntBASIC0.83□□□□□ -2.28
TRAV2A0A0B4J234 RBBP8P1-201ENST00000449447 1844 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 SNORA62.1-201ENST00000364287 154 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 SNORD115-48-201ENST00000364764 76 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 Y_RNA.327-201ENST00000365201 102 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 CCNG1P1-201ENST00000406783 885 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 AL133264.1-201ENST00000407157 562 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 SNRPEP10-201ENST00000420249 274 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 MTCO3P1-205ENST00000422088 832 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 Z82205.1-201ENST00000428456 297 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 ZNF965P-201ENST00000432501 817 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 AL353706.1-201ENST00000436728 494 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 AL603825.1-201ENST00000438481 80 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 AL354941.1-201ENST00000438600 464 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 BOLA3P3-201ENST00000505182 232 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 DUXAP1-201ENST00000556632 463 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 BNIP3P24-201ENST00000593398 557 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 AL359314.1-201ENST00000616913 261 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 AC092140.2-201ENST00000618027 521 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 AC099842.1-201ENST00000619919 596 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 U1.36-201ENST00000620684 176 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 AL512506.2-201ENST00000624472 458 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 AC017037.3-201ENST00000625016 472 ntBASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
TRAV2A0A0B4J234 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 RNU6-658P-201ENST00000384606 106 ntBASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 Y_RNA.548-201ENST00000384656 105 ntBASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 MIR618-201ENST00000385287 98 ntBASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 RNU2-36P-201ENST00000410361 191 ntBASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 AP000275.1-201ENST00000411943 390 ntBASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 AC092634.6-201ENST00000418558 192 ntBASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 AC010153.1-201ENST00000432862 727 ntBASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 MTND2P6-201ENST00000455337 1030 ntBASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 AC087343.1-201ENST00000477341 475 ntBASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 AP003497.1-201ENST00000528472 562 ntBASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 AC005832.3-201ENST00000537929 631 ntBASIC0.81□□□□□ -2.28
TRAV2A0A0B4J234 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms