Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 NDUFA5P6-201ENST00000542110 379 ntBASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 AC015712.3-201ENST00000559380 164 ntBASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 MIR4789-201ENST00000577469 82 ntBASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 AC026271.5-201ENST00000577873 130 ntBASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 AP002906.1-201ENST00000603405 233 ntBASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 KATNBL1P5-201ENST00000605015 517 ntBASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 AF129408.1-201ENST00000608767 431 ntBASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 AP005229.2-201ENST00000609980 697 ntBASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 AC011939.3-201ENST00000613686 466 ntBASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 AL157834.3-201ENST00000615543 103 ntBASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 AL353770.2-201ENST00000620024 78 ntBASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
TRAV27A0A087WT01 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 Y_RNA.25-201ENST00000362528 102 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 SNORD26-201ENST00000384147 75 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 MIR561-201ENST00000385216 97 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 OR6C66P-201ENST00000414917 930 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AC008379.1-201ENST00000463655 464 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AC011005.2-201ENST00000487324 359 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 RNU6-581P-201ENST00000516214 105 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 RNU6-1261P-201ENST00000517194 104 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AC023632.1-201ENST00000518463 375 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AP001189.2-201ENST00000527320 189 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AC087441.2-201ENST00000529141 262 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AL356432.3-201ENST00000568952 465 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AC012213.3-201ENST00000577199 777 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AL713866.2-201ENST00000603579 219 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AC069304.2-201ENST00000605154 435 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AC116312.1-201ENST00000606841 314 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AL353997.5-201ENST00000618886 171 ntBASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.02□□□□□ -2.25
TRAV27A0A087WT01 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 RNA5SP99-201ENST00000364020 114 ntBASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 RPL22P22-201ENST00000395439 379 ntBASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 TXNP7-201ENST00000406296 293 ntBASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 MIR1283-2-201ENST00000408621 87 ntBASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 RNU2-68P-201ENST00000410878 191 ntBASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 MTCO2P5-201ENST00000422621 426 ntBASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 AL137159.1-201ENST00000452808 512 ntBASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 snoU13.8-201ENST00000458890 104 ntBASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 AC112771.1-201ENST00000463581 102 ntBASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 AC006518.2-201ENST00000542513 940 ntBASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 AC023825.1-201ENST00000566704 1030 ntBASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 AP001542.2-201ENST00000593141 364 ntBASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 DUSP12P1-201ENST00000612874 516 ntBASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
TRAV27A0A087WT01 AP000776.1-201ENST00000530032 1663 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
TRAV27A0A087WT01 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1□□□□□ -2.25
TRAV27A0A087WT01 MIR16-2-201ENST00000362117 81 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 RNU4-51P-201ENST00000364206 140 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1□□□□□ -2.25
TRAV27A0A087WT01 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1□□□□□ -2.25
TRAV27A0A087WT01 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1□□□□□ -2.25
TRAV27A0A087WT01 AC007435.1-201ENST00000421086 415 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1□□□□□ -2.25
TRAV27A0A087WT01 RPL7P34-201ENST00000433316 712 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 AL353706.1-201ENST00000436728 494 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 AC092001.1-201ENST00000453012 261 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 AKIRIN2P1-201ENST00000505898 352 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 RN7SKP219-201ENST00000516825 296 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 RNU6-714P-201ENST00000516963 103 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1□□□□□ -2.25
TRAV27A0A087WT01 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1□□□□□ -2.25
TRAV27A0A087WT01 AC044913.1-201ENST00000557200 430 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 AC090330.1-201ENST00000588646 764 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 VN1R80P-201ENST00000597126 338 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1□□□□□ -2.25
TRAV27A0A087WT01 AP001485.1-201ENST00000604799 199 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 NDUFA8P1-201ENST00000605525 367 ntBASIC1□□□□□ -2.25
TRAV27A0A087WT01 AC092953.2-201ENST00000608000 699 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms