Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC078814.3-201ENST00000553036 491 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 MIR4424-201ENST00000585257 86 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AC024220.1-201ENST00000603675 484 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 HSPE1P7-201ENST00000604681 321 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 RNU6-89P-201ENST00000606519 100 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 Z82243.1-201ENST00000609432 473 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 FTX_3.1-201ENST00000610451 147 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 U2.17-201ENST00000611454 95 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AL161629.2-201ENST00000615347 275 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AC012314.7-201ENST00000619693 93 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 U6.99-201ENST00000637524 83 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AC007496.3-201ENST00000624987 3443 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AC092435.3-201ENST00000565538 3654 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AC093536.2-201ENST00000565257 1406 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 AL359693.1-201ENST00000614959 2407 ntBASIC3.17□□□□□ -1.9
CLDN16Q9Y5I7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 SRP72P2-201ENST00000344851 1979 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 MIR208A-201ENST00000362287 71 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 Y_RNA.157-201ENST00000363638 102 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 Y_RNA.390-201ENST00000383932 102 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 MIR578-201ENST00000384828 96 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 MIR7-3-201ENST00000384898 110 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AL356776.1-201ENST00000406574 447 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 Y_RNA.615-201ENST00000410769 117 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 BX323014.1-201ENST00000412876 237 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AC009161.1-201ENST00000417306 376 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AC007560.1-201ENST00000426912 237 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AL158071.1-201ENST00000430315 461 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AC005019.1-201ENST00000436455 431 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 MTCO3P18-201ENST00000440206 761 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 MRPS31P2-201ENST00000451581 518 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 CYCSP35-201ENST00000451978 304 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AC009901.1-201ENST00000506703 541 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 CCDC34P1-201ENST00000507441 517 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 FCF1P8-201ENST00000510322 597 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AC025755.1-201ENST00000521306 278 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 HMGB1P14-201ENST00000557424 591 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 RPL23AP78-201ENST00000599928 470 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AC012119.1-201ENST00000603184 222 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AC107294.3-201ENST00000609211 526 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 DUSP12P1-201ENST00000612874 516 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AC093913.1-201ENST00000614178 329 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AP003400.5-201ENST00000624827 617 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 MIR7153-201ENST00000637758 57 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 AC022336.2-201ENST00000568966 2538 ntBASIC3.16□□□□□ -1.9
CLDN16Q9Y5I7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLDN16Q9Y5I7 FAM35CP-201ENST00000554755 2470 ntBASIC3.15□□□□□ -1.9
CLDN16Q9Y5I7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.15□□□□□ -1.9
CLDN16Q9Y5I7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
CLDN16Q9Y5I7 RNU6-884P-201ENST00000363889 107 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 RNU6-371P-201ENST00000364283 108 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 RNA5SP267-201ENST00000364893 126 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 Y_RNA.378-201ENST00000365652 113 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 RNVU1-14-201ENST00000384770 164 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 MT-TL1-201ENST00000386347 75 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 RNA5SP219-201ENST00000390940 113 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 RPS15AP6-201ENST00000420703 385 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 HMGN2P30-201ENST00000423237 256 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 RPL23AP82-202ENST00000427528 469 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 SAR1AP4-201ENST00000429225 591 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 MTCO2P3-201ENST00000442543 421 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 PRPS1P1-201ENST00000445305 876 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 snoU13.28-201ENST00000459235 104 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 TBCAP3-201ENST00000512475 312 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 AC134698.4-201ENST00000523451 826 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 CENPUP1-201ENST00000526649 1202 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 AC006557.5-201ENST00000603126 811 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 AC092747.3-201ENST00000603769 301 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 AL035413.2-201ENST00000604801 525 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 RNVU1-4-201ENST00000612985 164 ntBASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN16Q9Y5I7 AC006504.8-201ENST00000621046 635 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms