Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 MIR6134-201ENST00000617606 109 ntBASIC2.94□□□□□ -1.94
LSM4Q9Y4Z0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.94□□□□□ -1.94
LSM4Q9Y4Z0 DUXAP9-208ENST00000622815 614 ntBASIC2.94□□□□□ -1.94
LSM4Q9Y4Z0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
LSM4Q9Y4Z0 CASC19-280ENST00000642102 1351 ntBASIC2.94□□□□□ -1.94
LSM4Q9Y4Z0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.94□□□□□ -1.94
LSM4Q9Y4Z0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LSM4Q9Y4Z0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LSM4Q9Y4Z0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 RNU6-799P-201ENST00000363567 107 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 RNA5SP42-201ENST00000364278 115 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 RNU6-1303P-201ENST00000364841 107 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 RNA5SP97-201ENST00000365006 84 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 Y_RNA.324-201ENST00000365165 102 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 Y_RNA.373-201ENST00000365600 103 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 MIR10A-201ENST00000385043 110 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 MIR34B-201ENST00000385076 84 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 RNU1-101P-201ENST00000391171 127 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 EIF4E2P1-201ENST00000393781 255 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 AC009237.5-201ENST00000414271 501 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 SYF2P2-201ENST00000417620 583 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 RPS3AP12-201ENST00000443616 753 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 AC007547.1-201ENST00000462177 490 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 AP000852.1-201ENST00000472460 573 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 AC018710.1-201ENST00000506509 158 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 SNORA14.1-201ENST00000516113 141 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 Y_RNA.665-201ENST00000516177 98 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 PSMA3P-201ENST00000555485 635 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 AC087499.8-201ENST00000578406 226 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 AC018638.8-201ENST00000588755 281 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 NUTF2P8-201ENST00000604593 363 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 AC100810.6-201ENST00000638068 285 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 AL732372.2-225ENST00000642124 456 ntBASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LSM4Q9Y4Z0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 Y_RNA.86-201ENST00000363020 111 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 Y_RNA.88-201ENST00000363029 99 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 Y_RNA.390-201ENST00000383932 102 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 MIR518D-201ENST00000385014 87 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 MIR483-201ENST00000385070 76 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 MT-TL1-201ENST00000386347 75 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AC009161.1-201ENST00000417306 376 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AC245291.1-201ENST00000419501 328 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AL159169.1-201ENST00000421119 127 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AL645937.1-202ENST00000421799 937 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 MRPS31P2-201ENST00000451581 518 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AL590639.1-201ENST00000456484 337 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AL136097.1-201ENST00000456945 913 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AC104472.2-201ENST00000469035 601 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AC118273.2-201ENST00000532092 465 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AC023050.3-201ENST00000541142 333 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AC002044.1-201ENST00000606707 158 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AC096577.2-201ENST00000611455 153 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AC091953.5-201ENST00000622919 233 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 MIR3199-2-201ENST00000636243 86 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 AC093536.2-201ENST00000565257 1406 ntBASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LSM4Q9Y4Z0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LSM4Q9Y4Z0 AC008669.1-201ENST00000565823 2178 ntBASIC2.91□□□□□ -1.94
LSM4Q9Y4Z0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
LSM4Q9Y4Z0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LSM4Q9Y4Z0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LSM4Q9Y4Z0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LSM4Q9Y4Z0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
LSM4Q9Y4Z0 RNU6-266P-201ENST00000364225 107 ntBASIC2.91□□□□□ -1.94
LSM4Q9Y4Z0 AL162578.1-201ENST00000406202 378 ntBASIC2.91□□□□□ -1.94
LSM4Q9Y4Z0 AL356776.1-201ENST00000406574 447 ntBASIC2.91□□□□□ -1.94
LSM4Q9Y4Z0 RAP1BP3-201ENST00000407180 549 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms