Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AL158823.1-201ENST00000418441 478 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 TIMM9P2-201ENST00000419324 266 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 TOMM20P4-201ENST00000427861 435 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 RPL36AP53-201ENST00000432891 316 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 DNAJC19P4-201ENST00000440115 345 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AL161788.1-201ENST00000441805 169 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 RPL36AP48-201ENST00000485521 314 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 RNU6-150P-201ENST00000516237 95 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 RNU6-1028P-201ENST00000517164 93 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AC005832.3-201ENST00000537929 631 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AC079598.5-201ENST00000547460 117 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AL132657.2-201ENST00000564417 358 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AC126365.2-201ENST00000580630 379 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AL031274.2-201ENST00000599419 203 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AC091057.3-201ENST00000602684 733 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AC004987.4-201ENST00000603383 338 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AC106052.1-201ENST00000608029 497 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AL773524.1-201ENST00000614065 229 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 ZNF876P-202ENST00000398732 1485 ntBASIC1.49□□□□□ -2.17
HDGFL3Q9Y3E1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AL353621.1-201ENST00000418219 243 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AL160275.3-201ENST00000423876 471 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 FAM92A1P2-202ENST00000504766 877 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AC020699.1-201ENST00000505161 445 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AC093809.1-201ENST00000509155 340 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AC117522.2-201ENST00000510049 657 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AC024589.1-201ENST00000512207 263 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AC021451.1-201ENST00000523498 1129 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AP005639.2-201ENST00000527592 928 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AC084851.1-201ENST00000529105 249 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AC093012.1-202ENST00000549403 582 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AC012213.3-201ENST00000577199 777 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 DPPA3P3-201ENST00000603842 430 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AP002802.2-201ENST00000605877 235 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AC009974.1-201ENST00000608881 455 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 MIR8081-201ENST00000611533 95 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 CDC27P3-201ENST00000635418 1910 ntBASIC1.48□□□□□ -2.17
HDGFL3Q9Y3E1 AL590084.1-201ENST00000407885 387 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 RPL21P24-201ENST00000413752 448 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 AL358453.1-201ENST00000422522 250 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 OR6C5P-201ENST00000452388 923 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 AC092001.1-201ENST00000453012 261 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 AC018868.1-201ENST00000491307 315 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 AC139453.3-201ENST00000493276 369 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 HMGB1P35-201ENST00000503360 598 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 SNORA4.4-201ENST00000515921 135 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 SNORA25.11-201ENST00000515935 105 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 RNU6-581P-201ENST00000516214 105 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 SNORA48.11-201ENST00000517015 89 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 RNU6-548P-201ENST00000517083 115 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 OR5AL2P-201ENST00000532185 920 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 CBX3P4-201ENST00000538909 354 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 LINC00933-203ENST00000559812 219 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 AC243960.4-201ENST00000600532 288 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 AL078605.1-201ENST00000603529 500 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 AC138627.2-201ENST00000624202 601 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 AC241585.2-209ENST00000638217 143 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 DDX43P2-201ENST00000604753 1354 ntBASIC1.47□□□□□ -2.17
HDGFL3Q9Y3E1 UBE2L2-201ENST00000254302 429 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 RNU6-188P-201ENST00000364207 107 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 SNORA25B-201ENST00000365507 128 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 MIR518A2-201ENST00000384966 87 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 RN7SKP101-201ENST00000411376 320 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 CYCSP49-201ENST00000420810 319 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 RPL23AP6-201ENST00000446637 472 ntBASIC1.46□□□□□ -2.18
HDGFL3Q9Y3E1 AL441985.1-201ENST00000457727 251 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms