Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 DUXAP1-201ENST00000556632 463 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 MIR3973-201ENST00000579824 107 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 BNIP3P8-201ENST00000597863 560 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 AC136443.5-201ENST00000603741 370 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 MIR6130-201ENST00000619419 109 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 AC024595.1-201ENST00000623088 387 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 Y_RNA.238-201ENST00000364441 102 ntBASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 SNORA29-201ENST00000384183 140 ntBASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 RNU6-441P-201ENST00000384545 106 ntBASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 MIR561-201ENST00000385216 97 ntBASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 MIR1287-201ENST00000408492 90 ntBASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 MIR1276-201ENST00000408707 83 ntBASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 POLR2J4-204ENST00000418424 324 ntBASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 CYP2C59P-201ENST00000457790 269 ntBASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 RPS20P20-201ENST00000460498 340 ntBASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 FABP5P5-201ENST00000515537 406 ntBASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 ACA64.5-201ENST00000516207 127 ntBASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 AP000907.2-201ENST00000530827 353 ntBASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 RAB11AP2-201ENST00000545905 639 ntBASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 AC093510.2-201ENST00000562820 896 ntBASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.48□□□□□ -2.33
UBE2D4Q9Y2X8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 Y_RNA.122-201ENST00000363331 96 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 RNU1-36P-201ENST00000365130 165 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 SNORD114-22-201ENST00000365423 72 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 RNU6-217P-201ENST00000384164 104 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 RNU6-439P-201ENST00000384188 106 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 RPL21P1-201ENST00000399532 476 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 HMGB1P17-201ENST00000403495 628 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 USP9YP24-201ENST00000434374 697 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 FCF1P6-201ENST00000456841 595 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 RPS29P1-201ENST00000465274 159 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 RPS26P55-201ENST00000471178 356 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 VPS26AP1-201ENST00000483197 979 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 AC004817.2-201ENST00000561794 651 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 AC002400.1-201ENST00000569310 726 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 MIR4661-201ENST00000582720 75 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 AL590095.2-201ENST00000604136 117 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 AC135803.1-201ENST00000608748 565 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 AC083806.3-201ENST00000614016 455 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 AC018926.3-201ENST00000618841 406 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 ZNF663P-202ENST00000641770 1131 ntBASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.47□□□□□ -2.33
UBE2D4Q9Y2X8 AC027514.1-201ENST00000588561 1603 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 Y_RNA.269-201ENST00000364685 89 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 RNU6-1-201ENST00000383898 107 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 RNU6-42P-201ENST00000384165 107 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 RNU6-36P-201ENST00000384172 107 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 RNU6-4P-201ENST00000384205 107 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 RNU6-5P-201ENST00000384238 107 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 RNU6-3P-201ENST00000384314 107 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 RNU6-2-201ENST00000384627 107 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 RNU6-9-201ENST00000384776 107 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 RNU6-33P-201ENST00000384793 107 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 AC069282.1-201ENST00000411911 526 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 AC009518.2-201ENST00000418056 731 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 C1DP1-201ENST00000426049 402 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 AC004941.2-201ENST00000427009 228 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 MTCO2P20-201ENST00000437339 673 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 RPL26P9-201ENST00000457466 433 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 AP001025.1-201ENST00000486139 332 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 AC117454.1-201ENST00000491120 168 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 AC079140.2-201ENST00000506193 142 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 RNU6-322P-201ENST00000516010 103 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 AC133485.1-201ENST00000567176 124 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 AC138907.6-201ENST00000568401 126 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 MIR151B-201ENST00000584249 96 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 WISP1-OT1-201ENST00000602893 642 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 RNU6-6P-201ENST00000606623 107 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
UBE2D4Q9Y2X8 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.45□□□□□ -2.34
UBE2D4Q9Y2X8 AL359854.1-201ENST00000614203 1594 ntBASIC0.45□□□□□ -2.34
UBE2D4Q9Y2X8 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
UBE2D4Q9Y2X8 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
UBE2D4Q9Y2X8 Y_RNA.226-201ENST00000364337 114 ntBASIC0.45□□□□□ -2.34
UBE2D4Q9Y2X8 RNU11-3P-201ENST00000391111 133 ntBASIC0.45□□□□□ -2.34
UBE2D4Q9Y2X8 RNA5SP501-201ENST00000410990 112 ntBASIC0.45□□□□□ -2.34
UBE2D4Q9Y2X8 RNU2-64P-201ENST00000411315 191 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms