Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC122133.1-201ENST00000613964 233 ntBASIC2.35□□□□□ -2.03
RNF6Q9Y252 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.35□□□□□ -2.03
RNF6Q9Y252 AC009878.1-201ENST00000621819 340 ntBASIC2.35□□□□□ -2.03
RNF6Q9Y252 AC079248.2-201ENST00000623779 326 ntBASIC2.35□□□□□ -2.03
RNF6Q9Y252 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.35□□□□□ -2.03
RNF6Q9Y252 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
RNF6Q9Y252 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
RNF6Q9Y252 AC080128.1-201ENST00000474389 1917 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.34□□□□□ -2.03
RNF6Q9Y252 RNA5SP393-201ENST00000363423 117 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 SNORA67.4-201ENST00000384688 142 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 MIR301A-201ENST00000385261 86 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 MIR147B-201ENST00000390185 80 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 RPLP0P7-201ENST00000416050 667 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.34□□□□□ -2.03
RNF6Q9Y252 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.34□□□□□ -2.03
RNF6Q9Y252 AL589872.1-201ENST00000426602 288 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 AC007560.1-201ENST00000426912 237 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.34□□□□□ -2.03
RNF6Q9Y252 AC104389.3-201ENST00000445629 235 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.34□□□□□ -2.03
RNF6Q9Y252 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.34□□□□□ -2.03
RNF6Q9Y252 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.34□□□□□ -2.03
RNF6Q9Y252 YWHAEP4-201ENST00000505390 198 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 Y_RNA.689-201ENST00000516589 107 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 RNU6-572P-201ENST00000516724 80 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
RNF6Q9Y252 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.34□□□□□ -2.03
RNF6Q9Y252 RPL7P20-201ENST00000520308 745 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 AC025755.1-201ENST00000521306 278 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 LRRC34P1-201ENST00000542742 915 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.34□□□□□ -2.03
RNF6Q9Y252 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.34□□□□□ -2.03
RNF6Q9Y252 AC027176.1-201ENST00000560204 514 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RNF6Q9Y252 SNORD53-201ENST00000579969 78 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.34□□□□□ -2.03
RNF6Q9Y252 MIR548AB-201ENST00000584917 84 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.34□□□□□ -2.03
RNF6Q9Y252 AL391813.1-201ENST00000603098 260 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 AC112191.3-201ENST00000604371 277 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 AL158032.1-201ENST00000605401 106 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 AC135507.1-201ENST00000607214 561 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 AL359757.2-201ENST00000624309 274 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 AC064859.1-201ENST00000624741 174 ntBASIC2.34□□□□□ -2.03
RNF6Q9Y252 AC080100.1-201ENST00000624239 5356 ntBASIC2.34□□□□□ -2.04
RNF6Q9Y252 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.34□□□□□ -2.04
RNF6Q9Y252 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RNF6Q9Y252 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RNF6Q9Y252 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.33□□□□□ -2.04
RNF6Q9Y252 AC135776.4-201ENST00000624300 1904 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 SNORD62.1-201ENST00000362541 86 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 RNU6-553P-201ENST00000364047 96 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 RNU6-960P-201ENST00000364056 120 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 SNORA4.3-201ENST00000365564 137 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 RNU6-19P-201ENST00000384718 107 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 AL162578.1-201ENST00000406202 378 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 NPM1P11-201ENST00000417106 855 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.33□□□□□ -2.04
RNF6Q9Y252 ELOCP4-201ENST00000420090 333 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 AC137499.1-201ENST00000427602 88 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RNF6Q9Y252 AL133217.1-201ENST00000450980 425 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 AC092001.1-201ENST00000453012 261 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 RNU7-26P-201ENST00000458980 63 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 AC023141.11-201ENST00000508864 202 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 NDUFB4P2-201ENST00000509515 391 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 RNU1-41P-201ENST00000516161 162 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 RNU1-48P-201ENST00000516400 162 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 RNA5SP24-201ENST00000516478 95 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 RNU6-914P-201ENST00000516749 109 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.33□□□□□ -2.04
RNF6Q9Y252 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.33□□□□□ -2.04
RNF6Q9Y252 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.33□□□□□ -2.04
RNF6Q9Y252 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.33□□□□□ -2.04
RNF6Q9Y252 HMGN1P30-201ENST00000589286 268 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RNF6Q9Y252 AC025034.2-201ENST00000623264 286 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 AC007494.3-201ENST00000624660 743 ntBASIC2.33□□□□□ -2.04
RNF6Q9Y252 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RNF6Q9Y252 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.32□□□□□ -2.04
RNF6Q9Y252 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.32□□□□□ -2.04
RNF6Q9Y252 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.32□□□□□ -2.04
RNF6Q9Y252 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RNF6Q9Y252 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.32□□□□□ -2.04
RNF6Q9Y252 AL031577.2-201ENST00000404133 280 ntBASIC2.32□□□□□ -2.04
RNF6Q9Y252 AC009963.1-201ENST00000417265 157 ntBASIC2.32□□□□□ -2.04
RNF6Q9Y252 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.32□□□□□ -2.04
RNF6Q9Y252 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.32□□□□□ -2.04
RNF6Q9Y252 SUMO1P4-201ENST00000429430 302 ntBASIC2.32□□□□□ -2.04
RNF6Q9Y252 Z98742.2-201ENST00000431564 187 ntBASIC2.32□□□□□ -2.04
RNF6Q9Y252 RPL23AP30-201ENST00000432419 501 ntBASIC2.32□□□□□ -2.04
RNF6Q9Y252 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.32□□□□□ -2.04
RNF6Q9Y252 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.32□□□□□ -2.04
RNF6Q9Y252 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.32□□□□□ -2.04
RNF6Q9Y252 ANXA2P1-201ENST00000505539 926 ntBASIC2.32□□□□□ -2.04
RNF6Q9Y252 SNORD19.2-201ENST00000516978 73 ntBASIC2.32□□□□□ -2.04
RNF6Q9Y252 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.32□□□□□ -2.04
RNF6Q9Y252 AP003122.3-201ENST00000526316 255 ntBASIC2.32□□□□□ -2.04
RNF6Q9Y252 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms