Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.74□□□□□ -1.65
SHROOM4Q9ULL8 AC008716.1-201ENST00000511084 513 ntBASIC4.74□□□□□ -1.65
SHROOM4Q9ULL8 RANP3-201ENST00000530970 276 ntBASIC4.74□□□□□ -1.65
SHROOM4Q9ULL8 AL391261.3-201ENST00000557194 520 ntBASIC4.74□□□□□ -1.65
SHROOM4Q9ULL8 MIR3167-201ENST00000579623 85 ntBASIC4.74□□□□□ -1.65
SHROOM4Q9ULL8 AC090578.1-201ENST00000604955 591 ntBASIC4.74□□□□□ -1.65
SHROOM4Q9ULL8 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SHROOM4Q9ULL8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHROOM4Q9ULL8 AC009487.4-201ENST00000624969 3585 ntBASIC4.74□□□□□ -1.65
SHROOM4Q9ULL8 AC099654.7-201ENST00000635788 2127 ntBASIC4.74□□□□□ -1.65
SHROOM4Q9ULL8 AC080125.1-201ENST00000414888 684 ntBASIC4.73□□□□□ -1.65
SHROOM4Q9ULL8 HMGN2P30-201ENST00000423237 256 ntBASIC4.73□□□□□ -1.65
SHROOM4Q9ULL8 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.73□□□□□ -1.65
SHROOM4Q9ULL8 Y_RNA.695-201ENST00000516715 107 ntBASIC4.73□□□□□ -1.65
SHROOM4Q9ULL8 RNU6-677P-201ENST00000516914 101 ntBASIC4.73□□□□□ -1.65
SHROOM4Q9ULL8 AC087883.1-201ENST00000551882 391 ntBASIC4.73□□□□□ -1.65
SHROOM4Q9ULL8 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.73□□□□□ -1.65
SHROOM4Q9ULL8 AC005498.1-201ENST00000592125 465 ntBASIC4.73□□□□□ -1.65
SHROOM4Q9ULL8 AC012119.1-201ENST00000603184 222 ntBASIC4.73□□□□□ -1.65
SHROOM4Q9ULL8 AL358072.1-201ENST00000604156 575 ntBASIC4.73□□□□□ -1.65
SHROOM4Q9ULL8 AC131902.3-201ENST00000611767 581 ntBASIC4.73□□□□□ -1.65
SHROOM4Q9ULL8 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.73□□□□□ -1.65
SHROOM4Q9ULL8 MTND5P42-201ENST00000637720 498 ntBASIC4.73□□□□□ -1.65
SHROOM4Q9ULL8 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM4Q9ULL8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM4Q9ULL8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHROOM4Q9ULL8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHROOM4Q9ULL8 RNU6-946P-201ENST00000383878 107 ntBASIC4.72□□□□□ -1.65
SHROOM4Q9ULL8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC4.72□□□□□ -1.65
SHROOM4Q9ULL8 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.72□□□□□ -1.65
SHROOM4Q9ULL8 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC4.72□□□□□ -1.65
SHROOM4Q9ULL8 RAC1P5-201ENST00000512182 576 ntBASIC4.72□□□□□ -1.65
SHROOM4Q9ULL8 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.72□□□□□ -1.65
SHROOM4Q9ULL8 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.72□□□□□ -1.65
SHROOM4Q9ULL8 AL136363.1-201ENST00000605349 337 ntBASIC4.72□□□□□ -1.65
SHROOM4Q9ULL8 AC087752.4-201ENST00000605911 462 ntBASIC4.72□□□□□ -1.65
SHROOM4Q9ULL8 DUSP12P1-201ENST00000612874 516 ntBASIC4.72□□□□□ -1.65
SHROOM4Q9ULL8 AC008498.1-201ENST00000613012 531 ntBASIC4.72□□□□□ -1.65
SHROOM4Q9ULL8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SHROOM4Q9ULL8 TEX21P-201ENST00000447107 1476 ntBASIC4.71□□□□□ -1.65
SHROOM4Q9ULL8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 MIR1302-8-201ENST00000408342 128 ntBASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 RNU2-39P-201ENST00000410604 198 ntBASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 NDUFS5P4-201ENST00000412983 318 ntBASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 DPPA2P1-201ENST00000428060 556 ntBASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 MTND1P27-201ENST00000451117 902 ntBASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 RPL31P3-201ENST00000458430 332 ntBASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 MTND4P2-201ENST00000507767 1203 ntBASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 AC117532.1-201ENST00000514638 323 ntBASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 AC025281.1-201ENST00000567026 265 ntBASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 AC073544.2-201ENST00000601155 540 ntBASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 AP000942.3-201ENST00000603702 160 ntBASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 FTX-214ENST00000638437 12267 ntTSL 5 BASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC4.71□□□□□ -1.66
SHROOM4Q9ULL8 AC069528.2-201ENST00000624849 1991 ntBASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 Y_RNA.77-201ENST00000362962 107 ntBASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 SNORD116-9-201ENST00000384000 95 ntBASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 SNORD116-3-201ENST00000384287 95 ntBASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 SNORD116-7-201ENST00000384404 95 ntBASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 SNORD116-5-201ENST00000384462 95 ntBASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 MIR767-201ENST00000390228 109 ntBASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 RN7SKP142-201ENST00000411236 328 ntBASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 RPL36AP53-201ENST00000432891 316 ntBASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 AC009961.2-201ENST00000435771 251 ntBASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 AC073614.1-201ENST00000438690 650 ntBASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 FABP5P15-201ENST00000453566 214 ntBASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 HMGN2P15-201ENST00000585707 270 ntBASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 RPL23AP78-201ENST00000599928 470 ntBASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 AC107871.2-201ENST00000612894 502 ntBASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHROOM4Q9ULL8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 RPS27P26-201ENST00000494583 239 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AC117522.1-201ENST00000509821 380 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AC072046.2-201ENST00000618366 268 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 AC080128.1-201ENST00000474389 1917 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 RNU6-188P-201ENST00000364207 107 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 SNORD116-2-201ENST00000384274 95 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 SNORD116-6-201ENST00000384711 96 ntBASIC4.69□□□□□ -1.66
SHROOM4Q9ULL8 MIR301A-201ENST00000385261 86 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms