Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 TRMT10BP1-201ENST00000519377 943 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 SNRPGP18-201ENST00000553000 214 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 AC120057.2-201ENST00000571520 271 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 AL355598.1-201ENST00000604169 202 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 AL160281.1-201ENST00000605307 311 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 U7.8-201ENST00000619968 63 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 U6.99-201ENST00000637524 83 ntBASIC4.58□□□□□ -1.68
DDX41Q9UJV9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
DDX41Q9UJV9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
DDX41Q9UJV9 RNU6-384P-201ENST00000364900 104 ntBASIC4.57□□□□□ -1.68
DDX41Q9UJV9 RNU6-933P-201ENST00000384424 107 ntBASIC4.57□□□□□ -1.68
DDX41Q9UJV9 SNORD73A-201ENST00000386062 65 ntBASIC4.57□□□□□ -1.68
DDX41Q9UJV9 Y_RNA.594-201ENST00000410373 140 ntBASIC4.57□□□□□ -1.68
DDX41Q9UJV9 PGBD4P6-201ENST00000421501 610 ntBASIC4.57□□□□□ -1.68
DDX41Q9UJV9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.57□□□□□ -1.68
DDX41Q9UJV9 AC098614.2-201ENST00000426040 255 ntBASIC4.57□□□□□ -1.68
DDX41Q9UJV9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.57□□□□□ -1.68
DDX41Q9UJV9 SNORD5.1-201ENST00000458800 75 ntBASIC4.57□□□□□ -1.68
DDX41Q9UJV9 RN7SL93P-201ENST00000463035 293 ntBASIC4.57□□□□□ -1.68
DDX41Q9UJV9 RPL9P32-201ENST00000464118 620 ntBASIC4.57□□□□□ -1.68
DDX41Q9UJV9 RNU6-1213P-201ENST00000517075 94 ntBASIC4.57□□□□□ -1.68
DDX41Q9UJV9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.57□□□□□ -1.68
DDX41Q9UJV9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.57□□□□□ -1.68
DDX41Q9UJV9 MIR5685-201ENST00000579080 79 ntBASIC4.57□□□□□ -1.68
DDX41Q9UJV9 SNRPGP17-201ENST00000603780 214 ntBASIC4.57□□□□□ -1.68
DDX41Q9UJV9 AC007938.3-201ENST00000604965 623 ntBASIC4.57□□□□□ -1.68
DDX41Q9UJV9 AL591516.1-201ENST00000611326 274 ntBASIC4.57□□□□□ -1.68
DDX41Q9UJV9 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
DDX41Q9UJV9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
DDX41Q9UJV9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
DDX41Q9UJV9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.57□□□□□ -1.68
DDX41Q9UJV9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.57□□□□□ -1.68
DDX41Q9UJV9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
DDX41Q9UJV9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
DDX41Q9UJV9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.57□□□□□ -1.68
DDX41Q9UJV9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
DDX41Q9UJV9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.56□□□□□ -1.68
DDX41Q9UJV9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
DDX41Q9UJV9 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.56□□□□□ -1.68
DDX41Q9UJV9 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
DDX41Q9UJV9 AC007685.1-201ENST00000329806 452 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-37P-201ENST00000362692 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU1-18P-201ENST00000363062 164 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-11P-201ENST00000364234 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-7-201ENST00000364784 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-8-201ENST00000365467 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-25P-201ENST00000383873 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-1-201ENST00000383898 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-48P-201ENST00000384161 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-36P-201ENST00000384172 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-4P-201ENST00000384205 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-5P-201ENST00000384238 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-3P-201ENST00000384314 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-16P-201ENST00000384385 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-790P-201ENST00000384479 105 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-15P-201ENST00000384534 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-2-201ENST00000384627 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-29P-201ENST00000384637 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-9-201ENST00000384776 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-33P-201ENST00000384793 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 MIR517A-201ENST00000385001 87 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 MIR670-201ENST00000390142 98 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 HSPE1P26-201ENST00000405341 275 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU2-37P-201ENST00000410695 177 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX41Q9UJV9 Z82205.1-201ENST00000428456 297 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 ATP5HP2-201ENST00000433885 485 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 AC007389.2-201ENST00000434630 306 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX41Q9UJV9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX41Q9UJV9 AC092798.1-201ENST00000458542 409 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-1037P-201ENST00000459571 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-976P-201ENST00000516086 111 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU7-143P-201ENST00000516781 65 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
DDX41Q9UJV9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.56□□□□□ -1.68
DDX41Q9UJV9 AC025627.2-201ENST00000576220 160 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 MIR4782-201ENST00000577987 79 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 MIR4444-1-201ENST00000581696 74 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 AC005899.2-201ENST00000584353 90 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 MIR4444-2-201ENST00000584390 74 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX41Q9UJV9 RNU6-6P-201ENST00000606623 107 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 FTX_3.1-201ENST00000610451 147 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 AL354798.1-201ENST00000622505 329 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 AC027309.3-201ENST00000623419 351 ntBASIC4.56□□□□□ -1.68
DDX41Q9UJV9 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.56□□□□□ -1.68
DDX41Q9UJV9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
DDX41Q9UJV9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
DDX41Q9UJV9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
DDX41Q9UJV9 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
DDX41Q9UJV9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms