Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 RNU6-82P-201ENST00000363970 107 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 RNU6-14P-201ENST00000384630 106 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 U8.11-201ENST00000384699 133 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 U8.12-201ENST00000384701 133 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 RPL21P17-201ENST00000397467 475 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 USP9YP20-201ENST00000419224 558 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 AC093106.2-201ENST00000428212 385 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.97□□□□□ -1.77
USP25Q9UHP3 PRDX3P3-201ENST00000447765 522 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 PPP1R2P5-201ENST00000457256 603 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 HMGN1P18-201ENST00000457642 277 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 SNORD105B-201ENST00000458770 79 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 U8.18-201ENST00000459285 133 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 AL135752.1-201ENST00000479477 471 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 MTCO1P29-201ENST00000496868 288 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 Y_RNA.654-201ENST00000497848 106 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.97□□□□□ -1.77
USP25Q9UHP3 CCDC34P1-201ENST00000507441 517 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 SNORA70.19-201ENST00000516717 90 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 AC068657.1-201ENST00000520807 306 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 MTND4P7-201ENST00000523876 130 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.97□□□□□ -1.77
USP25Q9UHP3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.97□□□□□ -1.77
USP25Q9UHP3 AL118558.2-201ENST00000556294 238 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 AC026464.5-201ENST00000562497 722 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.97□□□□□ -1.77
USP25Q9UHP3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.97□□□□□ -1.77
USP25Q9UHP3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.97□□□□□ -1.77
USP25Q9UHP3 AC022432.1-201ENST00000595739 310 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 BNIP3P25-201ENST00000596023 559 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 HSPE1P7-201ENST00000604681 321 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 AL133255.1-201ENST00000606374 441 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 AC092807.2-201ENST00000609367 243 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 AC107294.1-201ENST00000609524 467 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.97□□□□□ -1.77
USP25Q9UHP3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.97□□□□□ -1.77
USP25Q9UHP3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.97□□□□□ -1.77
USP25Q9UHP3 AC022336.2-201ENST00000568966 2538 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 MTND4P14-201ENST00000435799 1354 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 AC007496.3-201ENST00000624987 3443 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
USP25Q9UHP3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
USP25Q9UHP3 AL161912.2-201ENST00000565707 3007 ntBASIC3.97□□□□□ -1.77
USP25Q9UHP3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP25Q9UHP3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USP25Q9UHP3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.96□□□□□ -1.78
USP25Q9UHP3 RNA5SP51-201ENST00000364750 119 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 SNORA62.3-201ENST00000365110 153 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 RNU6-946P-201ENST00000383878 107 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 Y_RNA.387-201ENST00000383918 102 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 Y_RNA.394-201ENST00000383942 103 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 Y_RNA.414-201ENST00000384011 101 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 UBE2V1P2-201ENST00000397758 440 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 RNA5SP38-201ENST00000410750 119 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 BX323014.1-201ENST00000412876 237 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.96□□□□□ -1.78
USP25Q9UHP3 AC017079.2-201ENST00000416102 485 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.96□□□□□ -1.78
USP25Q9UHP3 RPL7P46-201ENST00000425129 740 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 RPL7P2-201ENST00000427639 268 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USP25Q9UHP3 Y_RNA.632-201ENST00000459189 102 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.96□□□□□ -1.78
USP25Q9UHP3 AC117522.3-201ENST00000507974 584 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 AC108078.2-201ENST00000510750 236 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 RNU6-864P-201ENST00000516256 108 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 RNU6-685P-201ENST00000517088 95 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 RNA5SP290-201ENST00000517133 127 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.96□□□□□ -1.78
USP25Q9UHP3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.96□□□□□ -1.78
USP25Q9UHP3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.96□□□□□ -1.78
USP25Q9UHP3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.96□□□□□ -1.78
USP25Q9UHP3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.96□□□□□ -1.78
USP25Q9UHP3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.96□□□□□ -1.78
USP25Q9UHP3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.96□□□□□ -1.78
USP25Q9UHP3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.96□□□□□ -1.78
USP25Q9UHP3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
USP25Q9UHP3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP25Q9UHP3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP25Q9UHP3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP25Q9UHP3 SNORD9-201ENST00000362566 104 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 Y_RNA.245-201ENST00000364493 95 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 Y_RNA.301-201ENST00000364990 103 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 Y_RNA.326-201ENST00000365176 113 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 Y_RNA.384-201ENST00000383909 102 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 Y_RNA.419-201ENST00000384041 102 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 AL139397.2-201ENST00000404529 772 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 AF228730.4-201ENST00000421457 183 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 AL451062.2-201ENST00000427515 271 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 CALM2P2-201ENST00000428512 440 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.95□□□□□ -1.78
USP25Q9UHP3 AC034236.1-201ENST00000469891 373 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.95□□□□□ -1.78
USP25Q9UHP3 HMGN1P11-201ENST00000508668 303 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 SNORA31.1-201ENST00000515993 133 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 SNORA31.5-201ENST00000516190 133 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 SNORA64.4-201ENST00000516632 81 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 RNU6-677P-201ENST00000516914 101 ntBASIC3.95□□□□□ -1.78
USP25Q9UHP3 AC023632.4-201ENST00000517783 191 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms