Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.12□□□□□ -1.91
LIMA1Q9UHB6 AC073534.2-201ENST00000620377 381 ntBASIC3.12□□□□□ -1.91
LIMA1Q9UHB6 AC068792.1-201ENST00000621354 417 ntBASIC3.12□□□□□ -1.91
LIMA1Q9UHB6 AL359740.1-201ENST00000624340 592 ntBASIC3.12□□□□□ -1.91
LIMA1Q9UHB6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.12□□□□□ -1.91
LIMA1Q9UHB6 AC008669.1-201ENST00000565823 2178 ntBASIC3.12□□□□□ -1.91
LIMA1Q9UHB6 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.12□□□□□ -1.91
LIMA1Q9UHB6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LIMA1Q9UHB6 CKAP2P1-201ENST00000555477 2049 ntBASIC3.12□□□□□ -1.91
LIMA1Q9UHB6 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 ELF2P3-201ENST00000445099 1506 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 RNU1-105P-201ENST00000363470 161 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 RNU6-395P-201ENST00000365662 106 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 RNU6-1029P-201ENST00000384109 107 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 RNU6-658P-201ENST00000384606 106 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 MIR767-201ENST00000390228 109 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 SNORA48.5-201ENST00000391143 135 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 UBE2V1P2-201ENST00000397758 440 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 RPS4XP8-201ENST00000402039 771 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 Y_RNA.619-201ENST00000410951 90 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 USP9YP6-201ENST00000413550 854 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 BPY2DP-201ENST00000422208 265 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 MTCYBP5-201ENST00000423752 1135 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AC098614.2-201ENST00000426040 255 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 GTF2IP20-201ENST00000431663 360 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 USP9YP28-201ENST00000435142 589 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 RPS15AP5-201ENST00000436276 388 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 BRK1P2-201ENST00000442875 223 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AL358232.1-201ENST00000448030 501 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 MTATP6P7-201ENST00000453315 681 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AC006512.1-201ENST00000468816 291 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 RPL9P6-201ENST00000492764 598 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 EIF4EP3-201ENST00000498782 656 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AC117522.3-201ENST00000507974 584 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 SNORA9.3-201ENST00000516383 129 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AC025755.1-201ENST00000521306 278 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 HPRT1P3-201ENST00000539521 576 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AC107016.2-201ENST00000547968 190 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 MIR3605-201ENST00000583214 100 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AL670379.4-201ENST00000605279 254 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AL158209.2-201ENST00000619266 216 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AC026585.1-201ENST00000619582 524 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AC005609.4-201ENST00000625071 447 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 MIR3651-201ENST00000630427 90 ntBASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LIMA1Q9UHB6 AC110491.1-201ENST00000562191 2010 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 AC068050.1-201ENST00000394891 380 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 AF274854.1-201ENST00000413236 615 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 OR6C66P-201ENST00000414917 930 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 RPL7P46-201ENST00000425129 740 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 AL513043.1-201ENST00000439124 535 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 AC104058.1-201ENST00000448028 297 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 RPS29P12-201ENST00000460178 152 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 AC128713.1-201ENST00000471495 306 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 RPS27P26-201ENST00000494583 239 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 AC074250.1-201ENST00000511117 192 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 SNORA31.19-201ENST00000517079 126 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 AC009812.2-201ENST00000517657 457 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 SUB1P1-201ENST00000524415 382 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 NACAP3-201ENST00000552100 481 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 AC010653.1-201ENST00000571108 881 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 MIR92B-201ENST00000607575 96 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 AC002064.3-201ENST00000623448 346 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 MIR6863-201ENST00000636112 90 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 U6.99-201ENST00000637524 83 ntBASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.1□□□□□ -1.91
LIMA1Q9UHB6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
LIMA1Q9UHB6 RNU6-1287P-201ENST00000362914 107 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms