Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC090502.2-201ENST00000549267 280 ntBASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 AC002545.1-201ENST00000592511 181 ntBASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 AL713866.2-201ENST00000603579 219 ntBASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 AC008121.3-201ENST00000618726 433 ntBASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 AL596245.1-201ENST00000618994 362 ntBASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 MTCO1P9-201ENST00000505577 1534 ntBASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 RNU5E-1-201ENST00000362477 120 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 SNORD115-3-201ENST00000363100 82 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 RNU1-57P-201ENST00000384491 166 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 MIR518D-201ENST00000385014 87 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 RNU2-36P-201ENST00000410361 191 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 RNU2-28P-201ENST00000410457 189 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AC127391.1-201ENST00000411737 98 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AL353621.1-201ENST00000418219 243 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AL451054.2-201ENST00000420896 202 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AC002381.1-201ENST00000447049 280 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 SNORA48.9-201ENST00000516419 162 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 RNU6-840P-201ENST00000517275 65 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AC084364.2-201ENST00000546924 395 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 HSPE1P19-201ENST00000603327 295 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AC004805.2-201ENST00000605382 482 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AC091946.2-201ENST00000606105 291 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AC092140.2-201ENST00000618027 521 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 U6.101-201ENST00000637707 76 ntBASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.91□□□□□ -2.26
COMMD3Q9UBI1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 RNU1-23P-201ENST00000363361 144 ntBASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 AL021407.1-201ENST00000404531 386 ntBASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 RNA5SP501-201ENST00000410990 112 ntBASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 AC007435.1-201ENST00000421086 415 ntBASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 AC245517.4-201ENST00000448601 281 ntBASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 AC005908.1-201ENST00000468701 347 ntBASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 RPL36AP21-201ENST00000490372 323 ntBASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 AC079598.5-201ENST00000547460 117 ntBASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 MIR4303-201ENST00000581299 66 ntBASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 ELOCP5-201ENST00000604924 333 ntBASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 SNORD114-21-201ENST00000606412 72 ntBASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 AL118556.2-201ENST00000614375 824 ntBASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 AC079416.3-201ENST00000624479 549 ntBASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.9□□□□□ -2.27
COMMD3Q9UBI1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 MIR1302-8-201ENST00000408342 128 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 MIR1261-201ENST00000408659 82 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 TPMTP3-201ENST00000411928 735 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 MTND4LP14-201ENST00000429447 288 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 AL353706.1-201ENST00000436728 494 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 MTCO2P20-201ENST00000437339 673 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 AC010095.1-201ENST00000443543 144 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 GDI2P2-201ENST00000445131 608 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 VN1R10P-201ENST00000447106 875 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 RPL39P29-201ENST00000447779 157 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 MTND3P4-201ENST00000453537 303 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 RPS15AP17-201ENST00000470598 390 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 RPL30P12-201ENST00000474666 353 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 AC013828.1-201ENST00000481845 158 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 RNA5SP290-201ENST00000517133 127 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 RNU6-902P-201ENST00000517212 91 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 CYCSP27-201ENST00000527643 293 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 AP003034.1-201ENST00000534621 422 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 AC104229.1-201ENST00000561364 255 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 MIR4421-201ENST00000578133 69 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 AL158211.4-201ENST00000606988 584 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 MIR8074-201ENST00000615081 81 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 RMST_10.1-201ENST00000616309 154 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 MIR1264-201ENST00000616374 69 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 AC002550.2-201ENST00000621246 394 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 AC106730.3-201ENST00000624568 641 ntBASIC0.89□□□□□ -2.27
COMMD3Q9UBI1 RBBP8P1-201ENST00000449447 1844 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms