Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC005668.1-201ENST00000571142 476 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.27□□□□□ -2.37
CHD7Q9P2D1 PIGFP2-201ENST00000421400 651 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 RNU6-775P-201ENST00000459318 96 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 AC087588.1-201ENST00000462203 316 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.27□□□□□ -2.37
CHD7Q9P2D1 MIR4493-201ENST00000584016 73 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 AL669831.4-202ENST00000590817 238 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 AC091925.2-201ENST00000625059 256 ntBASIC0.27□□□□□ -2.37
CHD7Q9P2D1 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.26□□□□□ -2.37
CHD7Q9P2D1 Y_RNA.552-201ENST00000384665 112 ntBASIC0.26□□□□□ -2.37
CHD7Q9P2D1 PIGPP2-201ENST00000411569 458 ntBASIC0.26□□□□□ -2.37
CHD7Q9P2D1 AC079140.2-201ENST00000506193 142 ntBASIC0.26□□□□□ -2.37
CHD7Q9P2D1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.26□□□□□ -2.37
CHD7Q9P2D1 SEPT2P1-201ENST00000419651 180 ntBASIC0.26□□□□□ -2.37
CHD7Q9P2D1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.26□□□□□ -2.37
CHD7Q9P2D1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.26□□□□□ -2.37
CHD7Q9P2D1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.26□□□□□ -2.37
CHD7Q9P2D1 HSPE1P21-201ENST00000438283 308 ntBASIC0.26□□□□□ -2.37
CHD7Q9P2D1 AC087879.1-201ENST00000474343 374 ntBASIC0.26□□□□□ -2.37
CHD7Q9P2D1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.26□□□□□ -2.37
CHD7Q9P2D1 SNRPGP17-201ENST00000603780 214 ntBASIC0.26□□□□□ -2.37
CHD7Q9P2D1 MZT1P2-201ENST00000604387 248 ntBASIC0.26□□□□□ -2.37
CHD7Q9P2D1 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.26□□□□□ -2.37
CHD7Q9P2D1 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
CHD7Q9P2D1 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
CHD7Q9P2D1 RNU6-700P-201ENST00000391043 107 ntBASIC0.25□□□□□ -2.37
CHD7Q9P2D1 RPS3AP37-201ENST00000419176 745 ntBASIC0.25□□□□□ -2.37
CHD7Q9P2D1 AC138853.1-201ENST00000503549 823 ntBASIC0.25□□□□□ -2.37
CHD7Q9P2D1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.25□□□□□ -2.37
CHD7Q9P2D1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.25□□□□□ -2.37
CHD7Q9P2D1 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.25□□□□□ -2.37
CHD7Q9P2D1 AP001180.6-201ENST00000584918 159 ntBASIC0.25□□□□□ -2.37
CHD7Q9P2D1 AL021879.1-201ENST00000611756 288 ntBASIC0.25□□□□□ -2.37
CHD7Q9P2D1 SNORA8-201ENST00000384574 139 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.24□□□□□ -2.37
CHD7Q9P2D1 RPL21P32-201ENST00000419877 477 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 OFD1P18Y-201ENST00000420889 959 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.24□□□□□ -2.37
CHD7Q9P2D1 AC118273.2-201ENST00000532092 465 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 MIR4713-201ENST00000582691 75 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.24□□□□□ -2.37
CHD7Q9P2D1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CHD7Q9P2D1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 RPL7P29-201ENST00000437151 728 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.24□□□□□ -2.37
CHD7Q9P2D1 AC090666.1-201ENST00000578241 445 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 AL450336.1-201ENST00000605180 586 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 AC090132.2-201ENST00000615881 347 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 AC020923.1-201ENST00000624021 917 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.24□□□□□ -2.37
CHD7Q9P2D1 RNU1-105P-201ENST00000363470 161 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.24□□□□□ -2.37
CHD7Q9P2D1 Y_RNA.644-201ENST00000459006 113 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 AC104108.1-201ENST00000509930 412 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 AC019288.1-201ENST00000557918 224 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 MIR5571-201ENST00000577998 113 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 AC016925.2-201ENST00000605108 242 ntBASIC0.24□□□□□ -2.37
CHD7Q9P2D1 RNU6-923P-201ENST00000364753 107 ntBASIC0.23□□□□□ -2.37
CHD7Q9P2D1 AL158823.1-201ENST00000418441 478 ntBASIC0.23□□□□□ -2.37
CHD7Q9P2D1 CYP2C59P-201ENST00000457790 269 ntBASIC0.23□□□□□ -2.37
CHD7Q9P2D1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.23□□□□□ -2.37
CHD7Q9P2D1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.23□□□□□ -2.37
CHD7Q9P2D1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.23□□□□□ -2.37
CHD7Q9P2D1 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CHD7Q9P2D1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
CHD7Q9P2D1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CHD7Q9P2D1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CHD7Q9P2D1 HMGB1P17-201ENST00000403495 628 ntBASIC0.23□□□□□ -2.37
CHD7Q9P2D1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.23□□□□□ -2.37
CHD7Q9P2D1 RPS29P8-201ENST00000445109 171 ntBASIC0.23□□□□□ -2.37
CHD7Q9P2D1 RPL21P47-201ENST00000483696 477 ntBASIC0.23□□□□□ -2.37
CHD7Q9P2D1 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.23□□□□□ -2.37
CHD7Q9P2D1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.23□□□□□ -2.37
CHD7Q9P2D1 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.23□□□□□ -2.37
CHD7Q9P2D1 HSPE1P19-201ENST00000603327 295 ntBASIC0.23□□□□□ -2.37
CHD7Q9P2D1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CHD7Q9P2D1 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.22□□□□□ -2.37
CHD7Q9P2D1 RNY4P24-201ENST00000362735 96 ntBASIC0.22□□□□□ -2.37
CHD7Q9P2D1 RPS3AP24-201ENST00000407896 734 ntBASIC0.22□□□□□ -2.37
CHD7Q9P2D1 RPL23AP33-201ENST00000442301 452 ntBASIC0.22□□□□□ -2.37
CHD7Q9P2D1 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.22□□□□□ -2.37
CHD7Q9P2D1 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.22□□□□□ -2.37
CHD7Q9P2D1 AP003717.3-201ENST00000544832 1180 ntBASIC0.22□□□□□ -2.37
CHD7Q9P2D1 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
CHD7Q9P2D1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.22□□□□□ -2.37
CHD7Q9P2D1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.22□□□□□ -2.37
CHD7Q9P2D1 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC0.22□□□□□ -2.37
CHD7Q9P2D1 AL353706.1-201ENST00000436728 494 ntBASIC0.22□□□□□ -2.37
CHD7Q9P2D1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.22□□□□□ -2.37
CHD7Q9P2D1 Y_RNA.757-201ENST00000578934 114 ntBASIC0.22□□□□□ -2.37
CHD7Q9P2D1 MIR6130-201ENST00000619419 109 ntBASIC0.22□□□□□ -2.37
CHD7Q9P2D1 MIR214-201ENST00000385214 110 ntBASIC0.21□□□□□ -2.38
CHD7Q9P2D1 RN7SKP142-201ENST00000411236 328 ntBASIC0.21□□□□□ -2.38
CHD7Q9P2D1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.21□□□□□ -2.38
CHD7Q9P2D1 RPEP5-201ENST00000441137 268 ntBASIC0.21□□□□□ -2.38
CHD7Q9P2D1 SETP11-201ENST00000473027 690 ntBASIC0.21□□□□□ -2.38
CHD7Q9P2D1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms