Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC098831.1-201ENST00000440661 216 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 ARPC3P5-201ENST00000448802 534 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AL049874.1-201ENST00000489560 388 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 RNU1-92P-201ENST00000517017 135 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 LINC00933-203ENST00000559812 219 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AC135507.1-201ENST00000607214 561 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AC106052.1-201ENST00000608029 497 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AC010133.1-201ENST00000615809 842 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AP002791.1-201ENST00000623291 381 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AL138713.1-201ENST00000624026 2130 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 Y_RNA.548-201ENST00000384656 105 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 RPL21P24-201ENST00000413752 448 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AL109913.1-201ENST00000421173 514 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 PPP1R11P2-201ENST00000423543 382 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AC007919.1-201ENST00000429380 217 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 SEPT7P5-201ENST00000434048 306 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 MTCYBP42-201ENST00000444653 1130 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AL121769.1-201ENST00000469473 401 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 RNU6-714P-201ENST00000516963 103 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AL353997.4-201ENST00000586196 166 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AP001269.3-201ENST00000588718 329 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AL357094.1-201ENST00000603845 844 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AC069294.1-201ENST00000608397 350 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 AP000720.1-201ENST00000625091 483 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 U2.21-201ENST00000637295 81 ntBASIC1.32□□□□□ -2.2
CCDC88CQ9P219 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CCDC88CQ9P219 CDC27P3-201ENST00000635418 1910 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 AL391987.6-201ENST00000305671 199 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC88CQ9P219 RNU6-884P-201ENST00000363889 107 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 RNU4-42P-201ENST00000364738 142 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 Y_RNA.472-201ENST00000384322 102 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC88CQ9P219 RPS3AP44-201ENST00000425466 790 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 VN1R108P-201ENST00000431580 830 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC88CQ9P219 RNU6-840P-201ENST00000517275 65 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 AP005435.4-201ENST00000529514 284 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 CYB5AP5-201ENST00000549779 389 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 AL133241.1-201ENST00000556832 487 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC88CQ9P219 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC88CQ9P219 AC002545.1-201ENST00000592511 181 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 SEPT7P9-203ENST00000604116 343 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 RPL21P136-201ENST00000605378 396 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 AL121652.1-201ENST00000608851 448 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 AC013476.2-201ENST00000614456 459 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 AC079416.3-201ENST00000624479 549 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 AC006927.4-201ENST00000639187 543 ntBASIC1.31□□□□□ -2.2
CCDC88CQ9P219 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.31□□□□□ -2.2
CCDC88CQ9P219 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC88CQ9P219 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC88CQ9P219 AC092447.10-201ENST00000620607 1652 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 RNU6-28P-201ENST00000362378 107 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 U8.3-201ENST00000363321 132 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 Y_RNA.245-201ENST00000364493 95 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 Y_RNA.338-201ENST00000365320 114 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 SNORA40C-201ENST00000391285 128 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 MTCO2P25-201ENST00000447065 681 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 snoU13.8-201ENST00000458890 104 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 MTND1P16-201ENST00000465177 898 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 MTCYBP18-201ENST00000501056 747 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AC020699.1-201ENST00000505161 445 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 OR6C7P-201ENST00000547875 934 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 MIR3126-201ENST00000577443 74 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AL021997.1-201ENST00000605757 193 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AC109809.1-201ENST00000619665 545 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AL138955.1-201ENST00000622881 1040 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AP003476.1-201ENST00000623984 516 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AC019226.1-201ENST00000625666 515 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 AC106858.1-201ENST00000637497 429 ntBASIC1.3□□□□□ -2.2
CCDC88CQ9P219 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CCDC88CQ9P219 Y_RNA.408-201ENST00000383987 102 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms