Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 HMGB1P14-201ENST00000557424 591 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 AC093913.1-201ENST00000614178 329 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 MIR6076-201ENST00000617521 113 ntBASIC3.65□□□□□ -1.83
COL20A1Q9P218 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL20A1Q9P218 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL20A1Q9P218 RNU6-867P-201ENST00000364956 107 ntBASIC3.64□□□□□ -1.83
COL20A1Q9P218 Y_RNA.303-201ENST00000364998 94 ntBASIC3.64□□□□□ -1.83
COL20A1Q9P218 SNORA7.4-201ENST00000384249 137 ntBASIC3.64□□□□□ -1.83
COL20A1Q9P218 AP000567.1-201ENST00000406413 156 ntBASIC3.64□□□□□ -1.83
COL20A1Q9P218 EEF1A1P40-201ENST00000412883 573 ntBASIC3.64□□□□□ -1.83
COL20A1Q9P218 RPL7P10-201ENST00000417407 739 ntBASIC3.64□□□□□ -1.83
COL20A1Q9P218 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.64□□□□□ -1.83
COL20A1Q9P218 AC098614.3-201ENST00000438957 440 ntBASIC3.64□□□□□ -1.83
COL20A1Q9P218 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.64□□□□□ -1.83
COL20A1Q9P218 CECR9-201ENST00000453421 199 ntBASIC3.64□□□□□ -1.83
COL20A1Q9P218 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.64□□□□□ -1.83
COL20A1Q9P218 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.64□□□□□ -1.83
COL20A1Q9P218 SUMO2P6-201ENST00000505273 288 ntBASIC3.64□□□□□ -1.83
COL20A1Q9P218 NDUFB4P9-201ENST00000511646 388 ntBASIC3.64□□□□□ -1.83
COL20A1Q9P218 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.64□□□□□ -1.83
COL20A1Q9P218 AP003122.3-201ENST00000526316 255 ntBASIC3.64□□□□□ -1.83
COL20A1Q9P218 AC084851.1-201ENST00000529105 249 ntBASIC3.64□□□□□ -1.83
COL20A1Q9P218 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.64□□□□□ -1.83
COL20A1Q9P218 AC005730.3-201ENST00000583067 366 ntBASIC3.64□□□□□ -1.83
COL20A1Q9P218 ATP5A1P2-202ENST00000616464 443 ntBASIC3.64□□□□□ -1.83
COL20A1Q9P218 AC092794.2-201ENST00000620933 563 ntBASIC3.64□□□□□ -1.83
COL20A1Q9P218 AC099506.2-201ENST00000623074 221 ntBASIC3.64□□□□□ -1.83
COL20A1Q9P218 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.64□□□□□ -1.83
COL20A1Q9P218 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
COL20A1Q9P218 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
COL20A1Q9P218 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
COL20A1Q9P218 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
COL20A1Q9P218 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL20A1Q9P218 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
COL20A1Q9P218 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL20A1Q9P218 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
COL20A1Q9P218 RNA5SP295-201ENST00000362655 121 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 RNU6-371P-201ENST00000364283 108 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 SNORA54-201ENST00000384281 123 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 RNU6-45P-201ENST00000384471 107 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL20A1Q9P218 AL162578.1-201ENST00000406202 378 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.63□□□□□ -1.83
COL20A1Q9P218 AC012498.1-201ENST00000424037 437 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 SNRPEP9-201ENST00000436794 238 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 CEACAMP4-201ENST00000457676 421 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 RNU6-1208P-201ENST00000459588 107 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 AP000852.1-201ENST00000472460 573 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.63□□□□□ -1.83
COL20A1Q9P218 MTCO3P9-201ENST00000506989 781 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 AC008885.1-201ENST00000514930 301 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 RNA5SP165-201ENST00000517142 115 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 RNU6-1231P-201ENST00000517185 103 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.63□□□□□ -1.83
COL20A1Q9P218 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.63□□□□□ -1.83
COL20A1Q9P218 TGIF1P1-201ENST00000558095 802 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.63□□□□□ -1.83
COL20A1Q9P218 MIR5583-1-201ENST00000580941 59 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.63□□□□□ -1.83
COL20A1Q9P218 AC004805.2-201ENST00000605382 482 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 uc_338.25-201ENST00000613756 156 ntBASIC3.63□□□□□ -1.83
COL20A1Q9P218 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL20A1Q9P218 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL20A1Q9P218 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
COL20A1Q9P218 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
COL20A1Q9P218 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.62□□□□□ -1.83
COL20A1Q9P218 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.62□□□□□ -1.83
COL20A1Q9P218 AC121333.1-201ENST00000567488 2709 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
COL20A1Q9P218 Y_RNA.279-201ENST00000364763 95 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 Y_RNA.373-201ENST00000365600 103 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.62□□□□□ -1.83
COL20A1Q9P218 AP002088.1-201ENST00000382740 395 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 RNU6-217P-201ENST00000384164 104 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 RNU6-510P-201ENST00000391239 108 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 POLHP1-201ENST00000411806 470 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 RPL21P90-201ENST00000415692 466 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.62□□□□□ -1.83
COL20A1Q9P218 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.62□□□□□ -1.83
COL20A1Q9P218 NEK4P1-201ENST00000433383 879 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 AL590664.1-201ENST00000448065 339 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.62□□□□□ -1.83
COL20A1Q9P218 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.62□□□□□ -1.83
COL20A1Q9P218 RNU7-167P-201ENST00000459160 62 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.62□□□□□ -1.83
COL20A1Q9P218 AL135752.1-201ENST00000479477 471 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 HMGB1P30-201ENST00000492455 606 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 CCDC34P1-201ENST00000507441 517 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.62□□□□□ -1.83
COL20A1Q9P218 AC114786.4-201ENST00000508771 728 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 HIGD1AP13-201ENST00000509878 289 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 AC008716.1-201ENST00000511084 513 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 RNU6-189P-201ENST00000516120 101 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 Y_RNA.702-201ENST00000516843 96 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.62□□□□□ -1.83
COL20A1Q9P218 AC011602.1-201ENST00000546484 331 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.62□□□□□ -1.83
COL20A1Q9P218 OR11H5P-201ENST00000554039 926 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 MTCO3P23-201ENST00000561363 289 ntBASIC3.62□□□□□ -1.83
COL20A1Q9P218 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms