Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 SEPT14P4-201ENST00000513445 186 ntBASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 AC112206.3-201ENST00000514578 389 ntBASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 RNU6-835P-201ENST00000516974 104 ntBASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 FO082796.1-201ENST00000523795 183 ntBASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 DNAJC8P1-201ENST00000554535 372 ntBASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 AL157687.1-201ENST00000554853 619 ntBASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 MIR3200-201ENST00000580767 85 ntBASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 AC107294.3-201ENST00000609211 526 ntBASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 U6atac.1-201ENST00000616025 117 ntBASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 AC005858.4-201ENST00000623191 700 ntBASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 MIR1321-201ENST00000637766 79 ntBASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 AC073346.2-201ENST00000624724 2058 ntBASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 SRP72P2-201ENST00000344851 1979 ntBASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.14□□□□□ -1.91
HCN3Q9P1Z3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AC010680.1-201ENST00000590024 3590 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AL139276.1-201ENST00000311910 1001 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 RNU1-70P-201ENST00000362618 164 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 RNU6-799P-201ENST00000363567 107 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 RNU6-371P-201ENST00000364283 108 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 SNORA75B-201ENST00000384053 137 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 Y_RNA.453-201ENST00000384223 109 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 MIR634-201ENST00000385208 97 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 SNORD70.1-201ENST00000391007 85 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 RNA5SP354-201ENST00000391247 136 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 RPS4XP7-201ENST00000406274 780 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 RPL5P18-201ENST00000406671 891 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 BTF3P7-201ENST00000407097 488 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 EIF1P1-201ENST00000421436 341 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 USP9YP18-201ENST00000425912 695 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AL078601.1-201ENST00000444542 271 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 MTATP6P7-201ENST00000453315 681 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 BX510359.1-201ENST00000456973 237 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 MTCO3P9-201ENST00000506989 781 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AC011352.1-201ENST00000512300 793 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 MIR2276-201ENST00000516886 89 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 RNU6-703P-201ENST00000516946 107 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 MTND4LP26-201ENST00000518144 282 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AC109635.3-201ENST00000529536 185 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AL137161.1-201ENST00000532231 390 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 NACAP3-201ENST00000552100 481 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 MIR5583-1-201ENST00000580941 59 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 MIR4298-201ENST00000584380 73 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AC099778.2-201ENST00000610904 211 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AC092794.1-201ENST00000612734 582 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 uc_338.34-201ENST00000617467 174 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AL356321.1-201ENST00000621360 228 ntBASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HCN3Q9P1Z3 AC007496.3-201ENST00000624987 3443 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 AC017071.1-201ENST00000564407 2204 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 MIR412-201ENST00000362142 91 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 SNORD3E-201ENST00000362899 217 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 RNU4-66P-201ENST00000365199 138 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 RNU6-45P-201ENST00000384471 107 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 MIR767-201ENST00000390228 109 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 SNORA40C-201ENST00000391285 128 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 RNA5SP120-201ENST00000410900 112 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 RNU6-1068P-201ENST00000410958 103 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 RNA5SP31-201ENST00000411144 127 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 BPY2DP-201ENST00000422208 265 ntBASIC3.12□□□□□ -1.91
HCN3Q9P1Z3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms