Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AL133396.1-201ENST00000432048 687 ntBASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 AC009237.8-201ENST00000445492 379 ntBASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 AL031274.1-201ENST00000450334 232 ntBASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 AP000873.1-201ENST00000463987 400 ntBASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 RN7SL271P-201ENST00000487601 295 ntBASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 AL132838.2-201ENST00000492041 314 ntBASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 RNA5SP165-201ENST00000517142 115 ntBASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 SNORD116.3-201ENST00000517176 78 ntBASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 OR8R1P-201ENST00000543943 764 ntBASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 TRAV32-201ENST00000553993 340 ntBASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 AC093227.2-201ENST00000589357 285 ntBASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 MIR6868-201ENST00000611215 58 ntBASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 AL591516.1-201ENST00000611326 274 ntBASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.82□□□□□ -1.8
KCMF1Q9P0J7 RLIMP1-201ENST00000339626 1680 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 Y_RNA.126-201ENST00000363382 111 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 RNA5SP322-201ENST00000363617 119 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 RNA5SP167-201ENST00000365461 116 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 Y_RNA.527-201ENST00000384573 102 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 MIR607-201ENST00000385241 96 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 RPL21P65-201ENST00000406094 466 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 RNU6-985P-201ENST00000410182 104 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 Y_RNA.623-201ENST00000411128 95 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 AC007560.1-201ENST00000426912 237 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 AL117339.2-201ENST00000430475 180 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 FTH1P6-201ENST00000430768 320 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 AL162151.2-201ENST00000448875 158 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 BTF3P15-201ENST00000455606 336 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 AC068781.1-201ENST00000488231 618 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 SNORA31.19-201ENST00000517079 126 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 AC023442.1-201ENST00000531247 422 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 TRAV28-201ENST00000557548 323 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 AL713922.2-201ENST00000619384 716 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 AL773545.4-201ENST00000637262 310 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 AL513478.4-201ENST00000641636 310 ntBASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KCMF1Q9P0J7 AC007785.2-201ENST00000598627 1916 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 AC007685.1-201ENST00000329806 452 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 RNU6-574P-201ENST00000384265 107 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 RNU6-463P-201ENST00000384340 107 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 RNU6-933P-201ENST00000384424 107 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 MIR10A-201ENST00000385043 110 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 MIR493-201ENST00000385254 89 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 MIR325-201ENST00000385260 98 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 AL096701.2-201ENST00000416920 238 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 BX276092.3-201ENST00000424182 230 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 TOMM20P4-201ENST00000427861 435 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 VDAC1P3-201ENST00000434069 851 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 DAP3P1-201ENST00000441522 278 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 RPL21P13-201ENST00000488305 481 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 AC005921.1-201ENST00000510589 286 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 FTH1P9-201ENST00000513251 355 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 AC004805.2-201ENST00000605382 482 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 MIR3976-201ENST00000606807 139 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 AL162373.1-201ENST00000620433 407 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 CDC27P3-201ENST00000635418 1910 ntBASIC3.8□□□□□ -1.8
KCMF1Q9P0J7 LINC02471-203ENST00000641941 4752 ntBASIC3.79□□□□□ -1.8
KCMF1Q9P0J7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms