Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 RNU6-600P-201ENST00000362524 99 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 RN7SKP280-201ENST00000364196 304 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 Y_RNA.445-201ENST00000384168 102 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 Y_RNA.482-201ENST00000384377 111 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 MIR578-201ENST00000384828 96 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 MIR184-201ENST00000384962 84 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 AC245054.2-201ENST00000415639 319 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 CRYBB2P1-203ENST00000415709 538 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 RPL17P36-201ENST00000420302 549 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 AL591419.1-201ENST00000427423 339 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 AC008264.1-201ENST00000447612 367 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 AL360271.2-201ENST00000447710 161 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 RPL23AP31-201ENST00000456160 467 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 MTND3P25-201ENST00000509243 135 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 SCARNA14-201ENST00000516903 136 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 AC025423.5-201ENST00000550230 219 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 HSPE1P5-201ENST00000561489 272 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 AC002545.1-201ENST00000592511 181 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 AC005344.1-201ENST00000613391 459 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 MIR6128-201ENST00000615528 109 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 Z99571.1-201ENST00000636677 394 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 AC007823.1-201ENST00000569932 1566 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
EHD3Q9NZN3 MFSD8-236ENST00000641509 4050 ntBASIC3.54□□□□□ -1.84
EHD3Q9NZN3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AC116096.1-201ENST00000566804 2314 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AC138393.1-203ENST00000327086 343 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 DEFB108F-201ENST00000344638 222 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 Y_RNA.146-201ENST00000363549 102 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 Y_RNA.187-201ENST00000363918 113 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 RNU6-266P-201ENST00000364225 107 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 MIR606-201ENST00000384851 96 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 RNU6-954P-201ENST00000411355 107 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AC063979.1-201ENST00000415539 377 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 RPL31P12-201ENST00000422587 358 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 RPL23AP69-201ENST00000431134 458 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 SNAP23P1-201ENST00000433229 246 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 HSPD1P21-201ENST00000436541 245 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 TXNP1-201ENST00000441872 371 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 Y_RNA.653-201ENST00000459091 95 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 RPL37P6-201ENST00000460682 294 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AC130509.1-201ENST00000464158 433 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AC010265.1-201ENST00000513509 211 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 APOOP4-201ENST00000513530 597 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 CYCSP27-201ENST00000527643 293 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AC087499.8-201ENST00000578406 226 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 MIR5685-201ENST00000579080 79 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 MIR3690-201ENST00000580266 75 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 MIR5187-201ENST00000583479 76 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 MIR5690-201ENST00000583739 73 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AL136164.4-201ENST00000625013 2135 ntBASIC3.53□□□□□ -1.84
EHD3Q9NZN3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
EHD3Q9NZN3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
EHD3Q9NZN3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.53□□□□□ -1.85
EHD3Q9NZN3 Y_RNA.31-201ENST00000362574 102 ntBASIC3.52□□□□□ -1.85
EHD3Q9NZN3 Y_RNA.473-201ENST00000384333 102 ntBASIC3.52□□□□□ -1.85
EHD3Q9NZN3 RNU6-308P-201ENST00000390957 107 ntBASIC3.52□□□□□ -1.85
EHD3Q9NZN3 AL391417.1-201ENST00000404100 426 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms