Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AP001486.3-201ENST00000615334 372 ntBASIC2.38□□□□□ -2.03
HOXC10Q9NYD6 AC091965.5-201ENST00000624785 342 ntBASIC2.38□□□□□ -2.03
HOXC10Q9NYD6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 AL359851.1-201ENST00000569460 4997 ntBASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 RNU6-140P-201ENST00000384566 108 ntBASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 AL356379.1-201ENST00000414105 126 ntBASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 AL008987.1-201ENST00000415528 237 ntBASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 USP9YP13-201ENST00000417797 480 ntBASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 AC004383.1-201ENST00000438135 289 ntBASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 AC104685.1-201ENST00000502445 371 ntBASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 OR5AQ1P-201ENST00000527596 927 ntBASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 AC087241.2-201ENST00000535801 324 ntBASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 AC090888.2-201ENST00000559765 1144 ntBASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 AL354943.1-201ENST00000572103 781 ntBASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 AC013562.2-201ENST00000611632 603 ntBASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 AC025048.6-202ENST00000627667 438 ntBASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 MTND5P30-201ENST00000452896 1731 ntBASIC2.37□□□□□ -2.03
HOXC10Q9NYD6 SNORA72.3-201ENST00000365074 132 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 SNORA46.1-201ENST00000391069 153 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AL359634.1-202ENST00000404721 284 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 RNU2-49P-201ENST00000410666 184 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 ZNF90P2-204ENST00000419323 1075 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AL022400.1-201ENST00000423946 935 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AC244035.1-201ENST00000430042 390 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 ELOCP30-201ENST00000447108 299 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AC010631.1-201ENST00000474150 156 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AC117522.2-201ENST00000510049 657 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 SNORA31.3-201ENST00000516029 96 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 RN7SKP258-201ENST00000517151 304 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AC078814.3-201ENST00000553036 491 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AL359212.1-201ENST00000556608 614 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 MIR4293-201ENST00000584305 78 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AC009977.1-201ENST00000586015 570 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AC002545.1-201ENST00000592511 181 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AC011494.1-201ENST00000596454 237 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AL357094.1-201ENST00000603845 844 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AL021997.1-201ENST00000605757 193 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AC007038.2-201ENST00000608095 740 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AC010678.1-201ENST00000614118 713 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AC068787.1-201ENST00000623908 691 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 AC103706.2-201ENST00000638080 240 ntBASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.36□□□□□ -2.03
HOXC10Q9NYD6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 RNU6-1284P-201ENST00000363701 100 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 Y_RNA.302-201ENST00000364997 102 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 RPL21P24-201ENST00000413752 448 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 HMGB1P11-201ENST00000413899 637 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 ELOCP14-201ENST00000428070 331 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 WARS2P1-201ENST00000429678 537 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 AL603825.1-201ENST00000438481 80 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 ELOCP7-201ENST00000439968 331 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 FABP5P13-201ENST00000452144 328 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 AC080013.2-201ENST00000460866 323 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 AC109486.1-201ENST00000486833 374 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 MTND5P13-201ENST00000513046 1079 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 AC093012.1-202ENST00000549403 582 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 AL133241.1-201ENST00000556832 487 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 AC002400.1-201ENST00000569310 726 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 MIR4287-201ENST00000579398 78 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 MIR4307-201ENST00000582802 84 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 AC069294.1-201ENST00000608397 350 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 U2.21-201ENST00000637295 81 ntBASIC2.35□□□□□ -2.03
HOXC10Q9NYD6 RNU6-1159P-201ENST00000362933 107 ntBASIC2.34□□□□□ -2.03
HOXC10Q9NYD6 MIR583-201ENST00000384846 75 ntBASIC2.34□□□□□ -2.03
HOXC10Q9NYD6 AL139397.2-201ENST00000404529 772 ntBASIC2.34□□□□□ -2.03
HOXC10Q9NYD6 RPL23AP39-201ENST00000415533 405 ntBASIC2.34□□□□□ -2.03
HOXC10Q9NYD6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms