Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 BNIP3P23-201ENST00000599655 511 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC073544.2-201ENST00000601155 540 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AL355598.1-201ENST00000604169 202 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC068276.1-201ENST00000605793 379 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC072039.2-201ENST00000608883 439 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 MIR4509-1-201ENST00000618224 94 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 U4atac.1-201ENST00000618345 95 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC012150.2-201ENST00000621300 544 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AP003400.5-201ENST00000624827 617 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 PISRT1-201ENST00000626175 531 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC104454.1-201ENST00000421341 1401 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC008555.8-201ENST00000623602 2168 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TREX1Q9NSU2 RNU6-723P-201ENST00000383973 107 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 RNU6-19P-201ENST00000384718 107 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 MIR122-201ENST00000385044 85 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 U6atac.2-201ENST00000408644 118 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AC003685.2-201ENST00000422795 395 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 RPS3AP44-201ENST00000425466 790 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AL445669.1-201ENST00000426743 755 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 RPL30P4-201ENST00000429309 333 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.87□□□□□ -2.11
TREX1Q9NSU2 TXNL1P1-201ENST00000429528 554 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AL513124.1-201ENST00000450410 614 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AC107032.1-201ENST00000485945 480 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AC055855.1-201ENST00000489563 579 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TREX1Q9NSU2 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
TREX1Q9NSU2 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AL049838.1-201ENST00000563647 981 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.87□□□□□ -2.11
TREX1Q9NSU2 MIR3124-201ENST00000582636 67 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.87□□□□□ -2.11
TREX1Q9NSU2 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AC091152.3-201ENST00000604227 325 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AC112220.3-201ENST00000605502 502 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AC005296.1-201ENST00000616145 209 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 AC009269.6-201ENST00000621778 588 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 U6.99-201ENST00000637524 83 ntBASIC1.87□□□□□ -2.11
TREX1Q9NSU2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TREX1Q9NSU2 RNU6-636P-201ENST00000384598 107 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 AL512604.1-201ENST00000404812 257 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 GSTA9P-201ENST00000406231 611 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 VPS26BP1-201ENST00000417155 755 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 AC092648.1-201ENST00000425870 423 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 MTCO2P20-201ENST00000437339 673 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.86□□□□□ -2.11
TREX1Q9NSU2 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
TREX1Q9NSU2 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.86□□□□□ -2.11
TREX1Q9NSU2 FABP5P13-201ENST00000452144 328 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 OR6C5P-201ENST00000452388 923 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 FABP5P15-201ENST00000453566 214 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 USP9YP25-201ENST00000457708 443 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 TRBV12-1-201ENST00000479785 344 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 RPS29P21-201ENST00000496272 170 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.86□□□□□ -2.11
TREX1Q9NSU2 RPF2P2-201ENST00000504693 896 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 RNU1-41P-201ENST00000516161 162 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 RNU1-48P-201ENST00000516400 162 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 SNORD19.2-201ENST00000516978 73 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.86□□□□□ -2.11
TREX1Q9NSU2 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.86□□□□□ -2.11
TREX1Q9NSU2 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.86□□□□□ -2.11
TREX1Q9NSU2 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.86□□□□□ -2.11
TREX1Q9NSU2 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.86□□□□□ -2.11
TREX1Q9NSU2 MIR3126-201ENST00000577443 74 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
TREX1Q9NSU2 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.86□□□□□ -2.11
TREX1Q9NSU2 AC005034.5-201ENST00000604219 466 ntBASIC1.86□□□□□ -2.11
TREX1Q9NSU2 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.86□□□□□ -2.11
TREX1Q9NSU2 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
TREX1Q9NSU2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
TREX1Q9NSU2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
TREX1Q9NSU2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TREX1Q9NSU2 NACAP2-201ENST00000318548 624 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 U8.2-201ENST00000363156 134 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 RNU4-92P-201ENST00000363783 136 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TREX1Q9NSU2 RNU6-701P-201ENST00000384059 107 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 U8.14-201ENST00000390843 143 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 RNU6-1242P-201ENST00000391052 103 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 NDUFS5P1-201ENST00000405668 289 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 MIR1305-201ENST00000408300 86 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.85□□□□□ -2.11
TREX1Q9NSU2 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.85□□□□□ -2.11
TREX1Q9NSU2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.85□□□□□ -2.11
TREX1Q9NSU2 MTND4P25-201ENST00000441039 533 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.85□□□□□ -2.11
TREX1Q9NSU2 MTCO1P42-201ENST00000457379 726 ntBASIC1.85□□□□□ -2.11
TREX1Q9NSU2 RN7SL274P-201ENST00000492268 272 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms