Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNU6-715P-201ENST00000365204 103 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 RNU6-1127P-201ENST00000384580 107 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 RNU6-658P-201ENST00000384606 106 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 SNORD37.1-201ENST00000390968 65 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 SNORD115-47-201ENST00000391226 86 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 RPL21P3-201ENST00000395517 478 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 AL606923.1-201ENST00000406616 190 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 HSPE1P1-201ENST00000421494 318 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 AC146507.2-201ENST00000460608 476 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 AC008155.2-201ENST00000464337 397 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 AL121769.1-201ENST00000469473 401 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 AC128713.1-201ENST00000471495 306 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 RPL23AP11-201ENST00000475260 469 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 AC104136.1-201ENST00000512969 394 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 LRRC34P2-201ENST00000514850 553 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 RNA5SP401-201ENST00000515920 127 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 RNU6-1178P-201ENST00000516674 107 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 MTND4LP26-201ENST00000518144 282 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 NACAP3-201ENST00000552100 481 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 AC107304.1-201ENST00000604229 296 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 MIR3688-2-201ENST00000636963 87 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 U6.99-201ENST00000637524 83 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
SLC6A13Q9NSD5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
SLC6A13Q9NSD5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 FAM35CP-201ENST00000554755 2470 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 MIR218-2-201ENST00000385006 110 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 RPL21P90-201ENST00000415692 466 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 BPY2DP-201ENST00000422208 265 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 AL669831.1-202ENST00000428504 417 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 GTF2IP20-201ENST00000431663 360 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 RPL23AP83-201ENST00000434984 473 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 GTF2IP13-201ENST00000438487 386 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 MTATP6P13-201ENST00000438531 667 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 AL078601.1-201ENST00000444542 271 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 SCARNA18-201ENST00000459004 134 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 RN7SL75P-201ENST00000461926 281 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 RNU4-29P-201ENST00000515943 174 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 RNU6-718P-201ENST00000516166 105 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 RN7SKP282-201ENST00000516824 299 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 MIR4782-201ENST00000577987 79 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 MIR4424-201ENST00000585257 86 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 uc_338.34-201ENST00000617467 174 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 U6.42-201ENST00000618440 107 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 AL355596.1-201ENST00000565399 3996 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 AC110491.1-201ENST00000562191 2010 ntBASIC3.02□□□□□ -1.93
SLC6A13Q9NSD5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 ASNSP3-201ENST00000451989 1306 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 RNU6-799P-201ENST00000363567 107 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 RNY3P3-201ENST00000363816 102 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 RNU6-166P-201ENST00000384371 107 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 RNU6-1179P-201ENST00000384667 107 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 Y_RNA.573-201ENST00000384763 105 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 BTF3P7-201ENST00000407097 488 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AL365496.1-201ENST00000426885 215 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AC007560.1-201ENST00000426912 237 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 RPS12P18-201ENST00000442381 270 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 RPS15AP27-201ENST00000449183 343 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 NDUFB1P2-201ENST00000449477 176 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 HMGB1P30-201ENST00000492455 606 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 SNORD60.2-201ENST00000516883 86 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 RNU6-1183P-201ENST00000517054 60 ntBASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.01□□□□□ -1.93
SLC6A13Q9NSD5 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms