Protein–RNA interactions for Protein: Q9NS15

LTBP3, Latent-transforming growth factor beta-binding protein 3, humanhuman

Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3Q9NS15 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LTBP3Q9NS15 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
LTBP3Q9NS15 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.49□□□□□ -1.69
LTBP3Q9NS15 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 AC138393.1-203ENST00000327086 343 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 AC007685.1-201ENST00000329806 452 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 Y_RNA.5-201ENST00000362334 102 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 Y_RNA.33-201ENST00000362591 102 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 RNU6-490P-201ENST00000362985 107 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 RNU4-70P-201ENST00000384579 139 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 UBA52P6-201ENST00000399822 382 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 AL590383.1-201ENST00000428602 75 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 HMGB1P9-201ENST00000429856 646 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 HMGB3P30-201ENST00000457863 606 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 RN7SL283P-201ENST00000489055 303 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 SUMO2P6-201ENST00000505273 288 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 MTCO2P24-201ENST00000515611 426 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 RNA5SP471-201ENST00000516971 106 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 HMGB1P24-202ENST00000615653 685 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 AL773545.4-201ENST00000637262 310 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 AL513478.4-201ENST00000641636 310 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 AC027290.2-201ENST00000623210 18662 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 AC118273.1-201ENST00000525324 3006 ntBASIC4.48□□□□□ -1.69
LTBP3Q9NS15 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LTBP3Q9NS15 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LTBP3Q9NS15 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
LTBP3Q9NS15 Y_RNA.158-201ENST00000363651 101 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 SNORA7.2-201ENST00000364446 145 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 Y_RNA.324-201ENST00000365165 102 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 RNU6-1032P-201ENST00000384100 107 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 Y_RNA.463-201ENST00000384271 102 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LTBP3Q9NS15 RNU6-1106P-201ENST00000390845 107 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 RNA5SP424-201ENST00000390988 115 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 MIR1271-201ENST00000408537 86 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 AC114482.1-201ENST00000418010 247 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.47□□□□□ -1.69
LTBP3Q9NS15 UBE2D3P2-201ENST00000424409 445 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 MTND2P29-201ENST00000438595 412 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 DEFB109F-201ENST00000491870 277 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 RNU6-470P-201ENST00000515954 104 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 SNORA31.8-201ENST00000516327 108 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 RNA5SP291-201ENST00000517222 105 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 FTH1P11-201ENST00000517577 551 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 AP003122.3-201ENST00000526316 255 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.47□□□□□ -1.69
LTBP3Q9NS15 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.47□□□□□ -1.69
LTBP3Q9NS15 EIF4BP1-201ENST00000554881 351 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.47□□□□□ -1.69
LTBP3Q9NS15 AC006363.1-201ENST00000603806 463 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 RMST_4.1-201ENST00000616886 107 ntBASIC4.47□□□□□ -1.69
LTBP3Q9NS15 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.47□□□□□ -1.69
LTBP3Q9NS15 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LTBP3Q9NS15 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LTBP3Q9NS15 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LTBP3Q9NS15 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LTBP3Q9NS15 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
LTBP3Q9NS15 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LTBP3Q9NS15 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
LTBP3Q9NS15 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LTBP3Q9NS15 Y_RNA.148-201ENST00000363557 117 ntBASIC4.46□□□□□ -1.69
LTBP3Q9NS15 Y_RNA.404-201ENST00000383978 102 ntBASIC4.46□□□□□ -1.69
LTBP3Q9NS15 RNU6-847P-201ENST00000411115 108 ntBASIC4.46□□□□□ -1.69
LTBP3Q9NS15 CYCSP33-201ENST00000414485 327 ntBASIC4.46□□□□□ -1.69
LTBP3Q9NS15 MCFD2P1-201ENST00000417812 300 ntBASIC4.46□□□□□ -1.69
LTBP3Q9NS15 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.46□□□□□ -1.69
LTBP3Q9NS15 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.46□□□□□ -1.69
LTBP3Q9NS15 USP9YP7-201ENST00000436723 430 ntBASIC4.46□□□□□ -1.69
LTBP3Q9NS15 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.46□□□□□ -1.69
LTBP3Q9NS15 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.46□□□□□ -1.69
LTBP3Q9NS15 RPS24P13-201ENST00000442520 397 ntBASIC4.46□□□□□ -1.69
LTBP3Q9NS15 HMGN2P21-201ENST00000447764 270 ntBASIC4.46□□□□□ -1.69
LTBP3Q9NS15 USP9YP32-201ENST00000452432 430 ntBASIC4.46□□□□□ -1.69
LTBP3Q9NS15 AL135752.1-201ENST00000479477 471 ntBASIC4.46□□□□□ -1.69
LTBP3Q9NS15 MIR892C-201ENST00000516410 77 ntBASIC4.46□□□□□ -1.69
LTBP3Q9NS15 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.46□□□□□ -1.69
LTBP3Q9NS15 AC011494.1-201ENST00000596454 237 ntBASIC4.46□□□□□ -1.69
LTBP3Q9NS15 ELOCP5-201ENST00000604924 333 ntBASIC4.46□□□□□ -1.69
LTBP3Q9NS15 AC007938.3-201ENST00000604965 623 ntBASIC4.46□□□□□ -1.69
LTBP3Q9NS15 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.46□□□□□ -1.69
LTBP3Q9NS15 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms